WormBase Tree Display for Sequence: L1_Nanopore_Roach_33192
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| L1_Nanopore_Roach_33192 | DNA | L1_Nanopore_Roach_33192 | 1215 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000024 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 9 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | K03E6.5b | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | K03E6.5b.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 9 entries comprising this consensus structure | ||||
| The cluster of 5' starts (100% : 9 of 9) has been used in this consensus. The 3' end is the median of a cluster of (88% : 8 of 9) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_X_8 | |||
| BLAT_Nanopore:OVOC_OM1b_93 | |||||
| BLAT_Nanopore:OVOC_OM1b_116 | |||||
| BLAT_Nanopore:OVOC_OM1b_163 | |||||
| BLAT_Nanopore:SRAE_chr2_86 | |||||
| BLAT_Nanopore:SRAE_chr2_95 | |||||
| BLAT_Nanopore:SRAE_chr2_99 | |||||
| BLAT_Nanopore:SRAE_chr1_6 | |||||
| BLAT_Nanopore:SRAE_chr1_18 | |||||
| BLAT_Nanopore:SRAE_chr1_39 | |||||
| Method | Nanopore |
