WormBase Tree Display for CDS: K12H4.3
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| K12H4.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K12H4 | |||
| Structure | Source_exons | 1 | 117 | |||
| 242 | 694 | |||||
| 768 | 906 | |||||
| 960 | 1183 | |||||
| 1327 | 1452 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34524 | ||
| UniProt | UniProtAcc | P34524 | ||||
| UniProt_GCRP | UniProtAcc | P34524 | ||||
| AlphaFold | entry | P34524 | ||||
| NCBI_protein | GI_number | GI:351063153 | ||||
| TREEFAM | TREEFAM_ID | TF105766 | ||||
| Protein_id | CHROMOSOME_III | CCD71195 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF04427 (Brix domain); contains similarity to Interpro domains IPR007109 (Brix domain), IPR026532 (Ribosome biogenesis protein BRX1) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00019678 | ||||
| Corresponding_transcript | K12H4.3.1 | |||||
| Corresponding_protein | CE00268 | |||||
| Corresponding_PCR_product | TH:302H9 | |||||
| TH:340H9 | ||||||
| cenix:302-h9 | ||||||
| cenix:340-h9 | ||||||
| mv_K12H4.3 | ||||||
| sjj_K12H4.3 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (67) | ||||||
| RNAi_result (22) | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Ribosome biogenesis protein BRX1 homolog | Accession_evidence | UniProt | SP:P34524 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf016128 | |||||
| Method | curated |
