WormBase Tree Display for CDS: K07G5.2
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K07G5.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K07G5 | |||
Structure | Source_exons | 1 | 71 | |||
115 | 212 | |||||
384 | 565 | |||||
611 | 712 | |||||
756 | 1028 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q21302 | ||
UniProt | UniProtAcc | Q21302 | ||||
UniProt_GCRP | UniProtAcc | Q21302 | ||||
AlphaFold | entry | Q21302 | ||||
NCBI_protein | GI_number | GI:3878401 | ||||
TREEFAM | TREEFAM_ID | TF101241 | ||||
Protein_id | CHROMOSOME_I | CAA95829 | 1 | |||
DB_remark | XPA-1 protein; contains similarity to Pfam domains PF01286 (XPA protein N-terminal), PF05181 (XPA protein C-terminus); contains similarity to Interpro domains IPR037129 (XPA domain superfamily), IPR000465 (XPA), IPR009061 (Putative DNA-binding domain superfamily), IPR022656 (XPA, C-terminal), IPR022652 (Zinc finger, XPA-type, conserved site) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006963 | ||||
Corresponding_transcript | K07G5.2.1 | |||||
Corresponding_protein | CE06130 | |||||
Corresponding_PCR_product | cenix:231-g10 | |||||
mv_K07G5.2 | ||||||
sjj_K07G5.2 | ||||||
smd_K07G5.2 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (35) | ||||||
RNAi_result (11) | ||||||
Microarray_results (19) | ||||||
Brief_identification | XPA C-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q21302 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |