WormBase Tree Display for CDS: K05D4.4
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| K05D4.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K05D4 | |||
| Structure | Source_exons | 1 | 193 | |||
| 349 | 575 | |||||
| 780 | 914 | |||||
| 967 | 1265 | |||||
| 1318 | 1666 | |||||
| 1719 | 1994 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O45659 | ||
| UniProt | UniProtAcc | O45659 | ||||
| UniProt_GCRP | UniProtAcc | O45659 | ||||
| AlphaFold | entry | O45659 | ||||
| NCBI_protein | GI_number | GI:3878293 | ||||
| Protein_id | CHROMOSOME_V | CAB07250 | 1 | |||
| DB_remark | CYP-33D1 protein; contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00010589 | ||||
| Corresponding_transcript | K05D4.4.1 | |||||
| Corresponding_protein | CE16230 | |||||
| Corresponding_PCR_product | cenix:61-c8 | |||||
| mv_K05D4.4 | ||||||
| sjj_K05D4.4 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_111307 | |||||
| OSTR185F8_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_60775 | Inferred_automatically | transcript_builder.pl | ||||
| FM250941 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_17877 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_19949 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR185F8_2 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF185F8_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00049983 | |||||
| WBRNAi00033985 | ||||||
| WBRNAi00092666 | ||||||
| WBRNAi00016623 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | CYtochrome P450 family | Accession_evidence | UniProt | TR:O45659 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
