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WormBase Tree Display for CDS: K01A2.7

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Name Class

K01A2.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceK01A2
StructureSource_exons1174
224437
7241347
14351607
DB_infoDatabaseTrEMBLUniProtAccQ9TZ57
UniProtUniProtAccQ9TZ57
UniProt_GCRPUniProtAccQ9TZ57
AlphaFoldentryQ9TZ57
NCBI_proteinGI_numberGI:351018047
TREEFAMTREEFAM_IDTF316414
Protein_idCHROMOSOME_IICCD619561
DB_remarkCOL-69 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000645
Corresponding_transcriptK01A2.7.1
Corresponding_proteinCE19515
Corresponding_PCR_productcenix:61-b7
mv_K01A2.7
sjj_K01A2.7
Corresponding_oligo_set (17)
Matching_cDNA (11)
RNAi_resultWBRNAi00016373
WBRNAi00049591
WBRNAi00033807
Microarray_results (18)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q9TZ57
RNASeq_FPKM (74)
Methodcurated