WormBase Tree Display for CDS: K01A2.7
expand all nodes | collapse all nodes | view schema
K01A2.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K01A2 | |||
Structure | Source_exons | 1 | 174 | |||
224 | 437 | |||||
724 | 1347 | |||||
1435 | 1607 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9TZ57 | ||
UniProt | UniProtAcc | Q9TZ57 | ||||
UniProt_GCRP | UniProtAcc | Q9TZ57 | ||||
AlphaFold | entry | Q9TZ57 | ||||
NCBI_protein | GI_number | GI:351018047 | ||||
TREEFAM | TREEFAM_ID | TF316414 | ||||
Protein_id | CHROMOSOME_II | CCD61956 | 1 | |||
DB_remark | COL-69 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000645 | ||||
Corresponding_transcript | K01A2.7.1 | |||||
Corresponding_protein | CE19515 | |||||
Corresponding_PCR_product | cenix:61-b7 | |||||
mv_K01A2.7 | ||||||
sjj_K01A2.7 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (11) | ||||||
RNAi_result | WBRNAi00016373 | |||||
WBRNAi00049591 | ||||||
WBRNAi00033807 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q9TZ57 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |