WormBase Tree Display for CDS: H02F09.3
expand all nodes | collapse all nodes | view schema
| H02F09.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | H02F09 | |||
| Structure | Source_exons | 1 | 124 | |||
| 177 | 286 | |||||
| 361 | 444 | |||||
| 496 | 581 | |||||
| 636 | 713 | |||||
| 780 | 967 | |||||
| 1020 | 4177 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O76602 | ||
| UniProt | UniProtAcc | O76602 | ||||
| UniProt_GCRP | UniProtAcc | O76602 | ||||
| AlphaFold | entry | O76602 | ||||
| NCBI_protein | GI_number | GI:351065794 | ||||
| TREEFAM | TREEFAM_ID | TF350087 | ||||
| Protein_id | CHROMOSOME_X | CCD61779 | 1 | |||
| DB_remark | contains similarity to Drosophila melanogaster Flybase gene name is Sgs4-PC; FLYBASE:CG12181 | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00019146 | ||||
| Corresponding_transcript | H02F09.3.1 | |||||
| Corresponding_protein | CE19479 | |||||
| Corresponding_PCR_product | cenix:108-c11 | |||||
| mv_H02F09.3 | ||||||
| sjj_H02F09.3 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_85688 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_85189 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_80578 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_74051 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00033643 | |||||
| WBRNAi00049259 | ||||||
| WBRNAi00016162 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | VWFA domain-containing protein | Accession_evidence | UniProt | TR:O76602 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
