WormBase Tree Display for Sequence: H01G02

H01G02 DNA: H01G02 23915
  SMap: S_child: Gene_child (13)
      CDS_child: H01G02.1:wp167 20098 17801
        H01G02.1a 20098 19470
        H01G02.1b 20098 19470
        H01G02.2 17070 14682
        H01G02.2:wp109 17070 14682
        H01G02.3a 8530 2837
        H01G02.3b 8530 2837
        H01G02.3c 8530 120
        H01G02.4 18287 17801
        H01G02.4:wp201 18287 17552
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g102_x24_IV_p 2248 2837
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g96m2_x24_IV_p 2445 2837
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g106n11_x24_IV_m 8530 4919
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g46n11_x24_IV_m 20098 19473
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g34n11s3k64_x24_IV_m 2830 2594
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g60n11_x24_IV_m 3687 3492
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g49s10k103_x24_IV_p 2248 2364
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g117_x24_IV_m 19778 19473
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g59n11s2k94_x24_IV_m 3671 3492
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g175_x24_IV_m 16334 16272
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g153_x24_IV_m 16984 16499
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g34n11_x24_IV_m 8530 2840
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g34n11e2k114_x24_IV_m 4994 4892
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g136_x24_IV_m 15953 15182
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g49m13_x24_IV_p 2100 2409
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40s10k108_x24_IV_p 2248 2364
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g22n11_x24_IV_m 8530 2840
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40m13_x24_IV_p 2100 2409
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g45n11_x24_IV_m 20098 19473
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g6n11_x24_IV_m 20098 20041
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g42n11_x24_IV_m 3687 3492
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g160_x24_IV_m 16524 16453
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g25n11_x24_IV_m 8530 2840
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g33n11_x24_IV_m 3687 3492
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g78_x24_IV_m 19772 19500
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g24n11_x24_IV_m 19837 19781
        RNASEQ_embryo_him-8_20dC_post-L1_g125_x24_IV_p 2445 2837
        RNASEQ_embryo_him-8_20dC_post-L1_g186_x24_IV_m 8368 3780
        RNASEQ_embryo_him-8_20dC_post-L1_g45n11_x24_IV_m 19837 19694
        RNASEQ_embryo_him-8_20dC_post-L1_g69n11s2k55_x24_IV_m 3671 2840
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g88n11_x24_IV_m 8530 2840
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g23n11_x24_IV_m 19793 19473
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g166_x24_IV_m 16040 15203
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3n11_x24_IV_m 20098 20041
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g97n11_x24_IV_m 3687 3492
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g95m1_x24_IV_p 2445 2837
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g95_x24_IV_p 2248 2837
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g33n11_x24_IV_m 20098 19749
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g97n11s2k97_x24_IV_m 3671 3492
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g171_x24_IV_m 18092 17804
        RNASEQ_L4_soma_JK1107_no_DNaseI_g27n11_x24t1_IV_m 20098 19473
        RNASEQ_L4_soma_JK1107_no_DNaseI_g179_x24_IV_p 2248 2409
        RNASEQ_L4_soma_JK1107_no_DNaseI_g119n11s2k93_x24_IV_m 3671 3492
        RNASEQ_L4_soma_JK1107_no_DNaseI_g163_x24_IV_m 2426 2247
        RNASEQ_L4_soma_JK1107_no_DNaseI_g119n11_x24_IV_m 8530 2840
        RNASEQ_L4_soma_JK1107_no_DNaseI_g64n11_x24_IV_m 3780 3492
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11s3k52_x24_IV_m 2830 2594
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g21n11s1k54_x24_IV_m 19793 19749
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g38s14k220_x24_IV_p 2248 2364
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g55n11_x24_IV_m 3687 3492
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g131_x24_IV_m 16524 16293
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11_x24_IV_m 8530 2840
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g171_x24_IV_m 14996 14943
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11e2k142_x24_IV_m 4994 4892
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g21n11_x24_IV_m 20098 19473
        RNASEQ_early_embryo_g68n11e2k135_x24_IV_m 4994 4892
        RNASEQ_early_embryo_g89n11_x24_IV_m 3780 3492
        RNASEQ_early_embryo_g68n11_x24_IV_m 8530 2840
        RNASEQ_early_embryo_g68n11s3k55_x24_IV_m 2830 2594
        RNASEQ_early_embryo_g96_x24_IV_m 16524 14685
        RNASEQ_early_embryo_g97n11_x24t1_IV_m 20098 20026
        RNASEQ_early_embryo_g67s4k225_x24_IV_p 2248 2364
        RNASEQ_early_embryo_g67m7_x24_IV_p 2100 2409
        RNASEQ_early_embryo_g68n11s2k99_x24_IV_m 3671 3492
        RNASEQ_early_embryo_g62n11_x24t1_IV_m 20098 19473
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58n11e2k155_x24_IV_m 4994 4892
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g96m2_x24_IV_m 16040 15918
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g96_x24_IV_m 16524 14685
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58n11s3k86_x24_IV_m 2830 2594
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41m19_x24_IV_p 2100 2409
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58n11_x24_IV_m 8530 2840
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g91n11_x24_IV_m 3780 3492
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g55n11_x24t1_IV_m 20098 19473
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58n11s2k124_x24_IV_m 3671 3492
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g99m3_x24_IV_m 16040 15918
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g43n11s3k73_x24t1_IV_m 2830 2594
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g103_x24_IV_m 17070 14685
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g52n11_x24t1_IV_m 3687 3492
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g43n11m2_x24t1_IV_m 3671 3492
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11_x24_IV_p 2248 2837
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g42n11_x24t1_IV_m 20098 19473
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g43n11_x24t1_IV_m 8530 2840
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11m1_x24_IV_p 2445 2837
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g31n11s1k52_x24t1_IV_m 19793 19749
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g44n11_x24_IV_m 8530 2840
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g126_x24_IV_m 15006 14832
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g120_x24_IV_m 16524 16272
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g44n11s2k336_x24_IV_m 3671 3492
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g127_x24_IV_m 16040 15146
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g31n11_x24t1_IV_m 20098 19473
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g4n11_x24t1_IV_m 20098 20041
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g39s11k190_x24_IV_p 2248 2364
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g56_x24t1_IV_m 19793 19473
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g100_x24_IV_m 2830 2594
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g123_x24_IV_m 18064 17953
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g108_x24_IV_m 8491 4892
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g69_x24_IV_p 2248 2837
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g117_x24_IV_m 8470 4943
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g129_x24t1_IV_m 165 16
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g171_x24_IV_m 18178 17947
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g95_x24_IV_p 2248 2702
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g166_x24_IV_m 4941 3758
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g95m1_x24_IV_p 2248 2409
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g142_x24_IV_p 109 998
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g58_x24_IV_m 19793 19473
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g115_x24_IV_m 3623 2840
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g67_x24_IV_m 19793 19749
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g107_x24_IV_p 2445 2750
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g42n11_x24_IV_m 20098 19473
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g205_x24_IV_p 1041 2151
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g203_x24_IV_m 4949 3703
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g41n11_x24_IV_m 20098 19473
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g124_x24_IV_m 3671 3525
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g19n11_x24_IV_m 20098 19473
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g70n11s2k91_x24_IV_m 3671 3492
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g70n11_x24_IV_m 8530 2840
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114m2_x24_IV_p 2445 2837
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114_x24_IV_p 2248 2837
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g46n11_x24_IV_m 20098 20026
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g112n11s2k93_x24_IV_m 3671 3492
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g109_x24_IV_p 2248 2837
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g66n11_x24_IV_m 3780 3492
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g112n11_x24_IV_m 8530 2840
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g6n11_x24_IV_m 20098 20041
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g109m1_x24_IV_p 2445 2837
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g24n11_x24_IV_m 20098 19473
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g149_x24_IV_m 8497 3780
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g13n11_x24t1_IV_m 20098 19473
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g89_x24_IV_p 2248 2837
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g89m2_x24_IV_p 2445 2837
        H01G02.gc1 979 2840
        H01G02.gc2 17070 3144
        H01G02.gc3 18287 17552
        H01G02.gc4 21156 19470
        ContigIV.elegans.jigsaw.2409.mRNA2409 20132 19384
        ContigIV.elegans.jigsaw.2408.mRNA2408 18292 17419
        ContigIV.elegans.jigsaw.2407.mRNA2407 17119 14648
        ContigIV.elegans.jigsaw.2406.mRNA2406 8620 8309
        AG1201_H01G02.3.T11 8530 120
        AG1201_H01G02.3.T10 2830 2591
        AG1201_H01G02.3.T2 8530 2837
        AG1201_H01G02.3.T4 8530 2837
        AG1201_H01G02.3.T1 8530 4889
        AG1201_H01G02.2.T5 16514 14682
        AG1201_H01G02.2.T2 16524 14682
        AG1201_H01G02.2.T1 17070 14682
        AG1201_H01G02.2.T4 17070 14682
        AG1201_H01G02.4.T1 18287 17801
        AG1201_H01G02.1.T5 19793 19470
        AG1201_H01G02.1.T1 20098 19470
        AG1201_H01G02.1.T3 20098 19470
        AG1201_H01G02.1.T6 21156 19470
      Transcript (17)
      PCR_product: cenix:124-f12 17558 18446
        cenix:46-c1 14709 15965
        mv_H01G02.1 17803 20097
        mv_H01G02.2 14684 17069
        p_H01G02.2_93 17071 17802
        sjj_H01G02.1 17733 19973
        sjj_H01G02.2 14793 16654
      Allele (329)
      Oligo_set: Aff_H01G02.1 19520 17801
        Aff_H01G02.2 16037 14682
        Aff_T12A7.5 2197 2840
      Feature_object (177)
      Feature_data: H01G02:Polysome 1 23915
        H01G02:TranscriptionallyActiveRegion 1 23915
        H01G02:ChIPSeqTF 1 23915
        H01G02:TRF 1 23915
        H01G02:Dust 1 23915
        H01G02:inverted 1 23915
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: M117 23807
    Overlap_left: T12A7
    Clone_left_end: M117 23807
    Clone_right_end: T12A7 104
  DB_info: Database: EMBL NDB_AC Z92847
        NDB_SV Z92847.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Kershaw JK
    From_laboratory: HX
    Date_directory: 970610
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: H01G02
  Properties: Genomic_canonical
    Checksum: MD5: 1771fc17632347848bffcf0d3d80fbb4
    Status: Finished: 10 Jun 1997 00:00:00
      Submitted: 12 Mar 1997 00:00:00
      Annotated: 23 Jul 1997 00:00:00
  Map: Sequence-IV Ends: Left: 6053
        Right: 6075
  Interpolated_map_position: IV 5.29691
  Assembly_tags: Finished Left 1 5 H01G02
    Clone right end 101 104
          T12A7
    annotation 7711 7711 this base could be A or T - fosmid PCR is unclear.
      7609 7679 single clone area - base accuracy cannot be guarenteed
    Clone left end 23807 23810 M117
    Finished Right 23915 23910 H01G02
  Method: Genomic_canonical