WormBase Tree Display for Sequence: F56D1
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| F56D1 | DNA | F56D1 | 36120 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (17) | ||||
| CDS_child (350) | ||||||
| Transcript (21) | ||||||
| Nongenomic | yk160b6 | 22839 | 29863 | |||
| PCR_product (32) | ||||||
| Allele (465) | ||||||
| Oligo_set | Aff_F56D1.1 | 34156 | 34808 | |||
| Aff_F56D1.2 | 31981 | 32722 | ||||
| Aff_F56D1.3 | 28919 | 29801 | ||||
| Aff_F56D1.4 | 27200 | 27896 | ||||
| Aff_F56D1.5 | 11894 | 12655 | ||||
| Aff_F56D1.6 | 2209 | 2951 | ||||
| Aff_F12A10.5 | 36547 | 35121 | ||||
| Feature_object | WBsf987885 | 1288 | 1438 | |||
| WBsf987886 | 2968 | 3118 | ||||
| WBsf987887 | 3788 | 3938 | ||||
| WBsf987888 | 14188 | 14338 | ||||
| WBsf987889 | 15428 | 15578 | ||||
| WBsf987890 | 16188 | 16338 | ||||
| WBsf987891 | 16768 | 16918 | ||||
| WBsf987892 | 17508 | 17658 | ||||
| WBsf987893 | 18408 | 18558 | ||||
| WBsf987894 | 20728 | 20878 | ||||
| WBsf1012229 | 1268 | 1418 | ||||
| WBsf1012230 | 2988 | 3138 | ||||
| WBsf1012231 | 15468 | 15618 | ||||
| WBsf1012232 | 20768 | 20891 | ||||
| WBsf005179 | 28883 | 28884 | ||||
| WBsf009464 | 8357 | 8358 | ||||
| WBsf011576 | 10815 | 10816 | ||||
| WBsf018167 | 28294 | 28299 | ||||
| WBsf018168 | 28311 | 28312 | ||||
| WBsf020081 | 2191 | 2192 | ||||
| WBsf022548 | 20875 | 20876 | ||||
| WBsf024865 | 29914 | 29919 | ||||
| WBsf027526 | 1118 | 1117 | ||||
| WBsf060786 | 10490 | 10490 | ||||
| WBsf060787 | 11252 | 11252 | ||||
| WBsf060788 | 23678 | 23678 | ||||
| WBsf060789 | 28102 | 28102 | ||||
| WBsf060790 | 32975 | 32975 | ||||
| WBsf060791 | 35121 | 35121 | ||||
| WBsf061859 | 3075 | 3075 | ||||
| WBsf061860 | 12756 | 12756 | ||||
| WBsf061861 | 34831 | 34831 | ||||
| WBsf062393 | 12400 | 12400 | ||||
| WBsf062394 | 35065 | 35065 | ||||
| WBsf062841 | 10371 | 10371 | ||||
| WBsf062842 | 31397 | 31397 | ||||
| WBsf062843 | 34910 | 34910 | ||||
| WBsf063235 | 13122 | 13122 | ||||
| WBsf063236 | 28317 | 28317 | ||||
| WBsf063237 | 29933 | 29933 | ||||
| WBsf063238 | 33035 | 33035 | ||||
| WBsf063900 | 32829 | 32829 | ||||
| WBsf063901 | 34832 | 34832 | ||||
| WBsf064671 | 3147 | 3147 | ||||
| WBsf064672 | 13128 | 13128 | ||||
| WBsf064673 | 22820 | 22820 | ||||
| WBsf064674 | 28314 | 28314 | ||||
| WBsf064675 | 35056 | 35056 | ||||
| WBsf065496 | 9741 | 9741 | ||||
| WBsf065497 | 13121 | 13121 | ||||
| WBsf065498 | 32872 | 32872 | ||||
| WBsf065499 | 35003 | 35003 | ||||
| WBsf066214 | 3100 | 3100 | ||||
| WBsf066215 | 34818 | 34818 | ||||
| WBsf066984 | 182 | 182 | ||||
| WBsf066985 | 3145 | 3145 | ||||
| WBsf066986 | 34808 | 34808 | ||||
| WBsf067445 | 28256 | 28256 | ||||
| WBsf067446 | 32842 | 32842 | ||||
| WBsf067447 | 34904 | 34904 | ||||
| WBsf125117 | 28822 | 28823 | ||||
| WBsf125368 | 30028 | 30029 | ||||
| WBsf125369 | 33130 | 33131 | ||||
| WBsf125630 | 10815 | 10816 | ||||
| WBsf125631 | 28883 | 28884 | ||||
| WBsf147608 | 33130 | 33131 | ||||
| WBsf147814 | 23619 | 23620 | ||||
| WBsf148322 | 182 | 182 | ||||
| WBsf149159 | 35121 | 35121 | ||||
| WBsf150181 | 35065 | 35065 | ||||
| WBsf150954 | 2486 | 2486 | ||||
| WBsf150955 | 13120 | 13120 | ||||
| WBsf150956 | 28315 | 28315 | ||||
| WBsf150957 | 33012 | 33012 | ||||
| WBsf150958 | 34936 | 34936 | ||||
| WBsf152003 | 3179 | 3179 | ||||
| WBsf152004 | 11208 | 11208 | ||||
| WBsf152005 | 22893 | 22893 | ||||
| WBsf152006 | 32625 | 32625 | ||||
| WBsf152007 | 34253 | 34253 | ||||
| WBsf152008 | 35054 | 35054 | ||||
| WBsf152735 | 23544 | 23544 | ||||
| WBsf153410 | 3141 | 3141 | ||||
| WBsf153411 | 32937 | 32937 | ||||
| WBsf154082 | 3144 | 3144 | ||||
| WBsf154083 | 10464 | 10464 | ||||
| WBsf154084 | 13078 | 13078 | ||||
| WBsf154085 | 23685 | 23685 | ||||
| WBsf154086 | 32870 | 32870 | ||||
| WBsf155399 | 13073 | 13073 | ||||
| WBsf155400 | 28262 | 28262 | ||||
| WBsf155401 | 32869 | 32869 | ||||
| WBsf155402 | 34939 | 34939 | ||||
| WBsf160282 | 28314 | 28315 | ||||
| WBsf160283 | 33035 | 33036 | ||||
| WBsf160663 | 29933 | 29934 | ||||
| WBsf160807 | 28102 | 28103 | ||||
| WBsf161149 | 10489 | 10490 | ||||
| WBsf221281 | 2952 | 3125 | ||||
| WBsf221282 | 2952 | 3140 | ||||
| WBsf221283 | 2952 | 3177 | ||||
| WBsf221284 | 10297 | 10487 | ||||
| WBsf221285 | 27897 | 28310 | ||||
| WBsf221286 | 29802 | 29933 | ||||
| WBsf221287 | 32723 | 33032 | ||||
| WBsf242409 | 10488 | 10489 | ||||
| WBsf242410 | 13131 | 13132 | ||||
| WBsf242411 | 33033 | 33034 | ||||
| WBsf244224 | 34958 | 34957 | ||||
| WBsf244449 | 35001 | 35002 | ||||
| WBsf244450 | 3158 | 3159 | ||||
| WBsf245277 | 28325 | 28326 | ||||
| WBsf245278 | 27103 | 27104 | ||||
| WBsf245284 | 29934 | 29935 | ||||
| WBsf270838 | 3141 | 3142 | ||||
| WBsf271198 | 29932 | 29933 | ||||
| WBsf271783 | 12993 | 12994 | ||||
| WBsf272018 | 13116 | 13117 | ||||
| WBsf608505 | 29912 | 29913 | ||||
| WBsf608819 | 29923 | 29924 | ||||
| WBsf609202 | 28112 | 28113 | ||||
| WBsf609453 | 3070 | 3071 | ||||
| WBsf609495 | 29891 | 29892 | ||||
| WBsf609535 | 3126 | 3127 | ||||
| WBsf609611 | 13118 | 13119 | ||||
| WBsf609755 | 6441 | 6442 | ||||
| WBsf609776 | 3087 | 3088 | ||||
| WBsf609868 | 35021 | 35022 | ||||
| WBsf610094 | 3100 | 3101 | ||||
| WBsf610587 | 34321 | 34322 | ||||
| WBsf610682 | 28292 | 28293 | ||||
| WBsf610776 | 3201 | 3202 | ||||
| WBsf610856 | 10418 | 10419 | ||||
| WBsf610898 | 28101 | 28102 | ||||
| WBsf611472 | 34974 | 34973 | ||||
| WBsf612439 | 34994 | 34993 | ||||
| WBsf613516 | 13775 | 13774 | ||||
| WBsf613871 | 13777 | 13776 | ||||
| WBsf614528 | 13770 | 13769 | ||||
| WBsf953901 | 2191 | 2192 | ||||
| WBsf953902 | 11127 | 11128 | ||||
| WBsf953903 | 13972 | 13971 | ||||
| WBsf953904 | 20875 | 20876 | ||||
| WBsf953905 | 20904 | 20905 | ||||
| WBsf953906 | 23394 | 23395 | ||||
| WBsf953907 | 23899 | 23900 | ||||
| WBsf953908 | 24299 | 24300 | ||||
| WBsf953909 | 28822 | 28823 | ||||
| WBsf953910 | 29762 | 29763 | ||||
| WBsf953911 | 30812 | 30813 | ||||
| WBsf979722 | 3145 | 3146 | ||||
| WBsf034634 | 20990 | 22888 | ||||
| WBsf034635 | 23040 | 23138 | ||||
| WBsf034636 | 23890 | 27988 | ||||
| WBsf034638 | 29190 | 30288 | ||||
| WBsf034639 | 30790 | 31688 | ||||
| WBsf034640 | 32390 | 32588 | ||||
| WBsf341338 | 27957 | 28816 | ||||
| WBsf342090 | 28397 | 28698 | ||||
| WBsf343046 | 19216 | 19638 | ||||
| WBsf343132 | 28524 | 28812 | ||||
| WBsf343440 | 19968 | 20109 | ||||
| WBsf343464 | 18088 | 18809 | ||||
| WBsf343938 | 13919 | 14547 | ||||
| WBsf344018 | 13100 | 13711 | ||||
| WBsf344346 | 4174 | 4518 | ||||
| WBsf344502 | 19249 | 20103 | ||||
| WBsf344620 | 28496 | 28878 | ||||
| WBsf344742 | 15397 | 15876 | ||||
| WBsf344758 | 18199 | 18842 | ||||
| WBsf344781 | 5600 | 5917 | ||||
| WBsf344986 | 5060 | 5266 | ||||
| WBsf345214 | 6195 | 6296 | ||||
| WBsf345329 | 21844 | 22058 | ||||
| WBsf345333 | 17340 | 17592 | ||||
| WBsf345439 | 9121 | 9292 | ||||
| WBsf345554 | 8341 | 8506 | ||||
| WBsf345612 | 28402 | 28875 | ||||
| WBsf346798 | 15560 | 15831 | ||||
| WBsf347285 | 14194 | 14283 | ||||
| WBsf347492 | 13246 | 13437 | ||||
| WBsf347618 | 28614 | 28986 | ||||
| WBsf347959 | 15432 | 15664 | ||||
| WBsf348116 | 30120 | 30305 | ||||
| WBsf348915 | 15386 | 15656 | ||||
| WBsf350399 | 9421 | 9573 | ||||
| WBsf350706 | 3657 | 4621 | ||||
| WBsf350971 | 15416 | 15941 | ||||
| WBsf351344 | 13197 | 13568 | ||||
| WBsf351563 | 5653 | 5972 | ||||
| WBsf351620 | 28506 | 28842 | ||||
| WBsf351627 | 14009 | 14378 | ||||
| WBsf351924 | 19825 | 20772 | ||||
| WBsf351988 | 10416 | 10650 | ||||
| WBsf352403 | 5016 | 5290 | ||||
| WBsf352437 | 8153 | 8426 | ||||
| WBsf352737 | 18336 | 18670 | ||||
| WBsf352804 | 16590 | 16907 | ||||
| WBsf353262 | 17450 | 17626 | ||||
| WBsf353286 | 7648 | 7734 | ||||
| WBsf354829 | 21545 | 21562 | ||||
| WBsf355093 | 3785 | 4334 | ||||
| WBsf355206 | 20403 | 20889 | ||||
| WBsf355294 | 28536 | 28833 | ||||
| WBsf355303 | 13250 | 13535 | ||||
| WBsf355500 | 14079 | 14457 | ||||
| WBsf355648 | 13157 | 13593 | ||||
| WBsf355961 | 21834 | 22087 | ||||
| WBsf356028 | 4217 | 4454 | ||||
| WBsf356071 | 15547 | 15850 | ||||
| WBsf356270 | 18287 | 18812 | ||||
| WBsf356483 | 28530 | 28808 | ||||
| WBsf356794 | 18287 | 18812 | ||||
| WBsf357009 | 28530 | 28808 | ||||
| WBsf357479 | 15393 | 15684 | ||||
| WBsf357636 | 28440 | 28879 | ||||
| WBsf358203 | 28452 | 28752 | ||||
| WBsf358444 | 28520 | 28805 | ||||
| WBsf359669 | 15363 | 15879 | ||||
| WBsf359712 | 13998 | 14462 | ||||
| WBsf360007 | 13262 | 13531 | ||||
| WBsf360451 | 28524 | 28839 | ||||
| WBsf361462 | 28502 | 28796 | ||||
| WBsf362421 | 3753 | 4414 | ||||
| WBsf362449 | 18034 | 18775 | ||||
| WBsf362470 | 20572 | 20957 | ||||
| WBsf362763 | 14332 | 14603 | ||||
| WBsf363018 | 21545 | 21669 | ||||
| WBsf364209 | 28496 | 28805 | ||||
| WBsf364768 | 18209 | 18752 | ||||
| WBsf364991 | 16064 | 16387 | ||||
| WBsf365358 | 9263 | 10705 | ||||
| WBsf365391 | 23602 | 25246 | ||||
| WBsf365499 | 27672 | 28860 | ||||
| WBsf365682 | 8266 | 8977 | ||||
| WBsf365692 | 14347 | 14571 | ||||
| WBsf365727 | 21593 | 22159 | ||||
| WBsf366327 | 28544 | 28805 | ||||
| WBsf367147 | 28509 | 28827 | ||||
| WBsf367204 | 15369 | 15704 | ||||
| WBsf367260 | 18285 | 18723 | ||||
| WBsf367462 | 23848 | 29060 | ||||
| WBsf368203 | 23209 | 23210 | ||||
| WBsf368223 | 22047 | 22591 | ||||
| WBsf368417 | 20920 | 21098 | ||||
| WBsf368458 | 21386 | 21675 | ||||
| WBsf368482 | 33274 | 33826 | ||||
| WBsf370014 | 18325 | 18839 | ||||
| WBsf370535 | 20620 | 21666 | ||||
| WBsf370606 | 23936 | 24940 | ||||
| WBsf370609 | 28540 | 28813 | ||||
| WBsf370655 | 18452 | 18771 | ||||
| WBsf371005 | 25417 | 25808 | ||||
| WBsf371301 | 22455 | 22755 | ||||
| WBsf371311 | 33131 | 33350 | ||||
| WBsf371389 | 14236 | 14467 | ||||
| WBsf371963 | 28522 | 28812 | ||||
| WBsf372051 | 24698 | 25044 | ||||
| WBsf372169 | 28106 | 28301 | ||||
| WBsf372234 | 22977 | 23150 | ||||
| WBsf372356 | 27335 | 27752 | ||||
| WBsf372411 | 25543 | 26019 | ||||
| WBsf373204 | 18305 | 18404 | ||||
| WBsf373961 | 3813 | 4499 | ||||
| WBsf374390 | 18395 | 18801 | ||||
| WBsf374429 | 14047 | 14486 | ||||
| WBsf374458 | 13192 | 13539 | ||||
| WBsf374902 | 15411 | 15774 | ||||
| WBsf375522 | 28510 | 28775 | ||||
| WBsf375570 | 28329 | 29060 | ||||
| WBsf376277 | 18377 | 18750 | ||||
| WBsf376448 | 28349 | 29044 | ||||
| WBsf378148 | 15333 | 15765 | ||||
| WBsf378235 | 28556 | 28803 | ||||
| WBsf378992 | 29567 | 29840 | ||||
| WBsf379029 | 28518 | 28845 | ||||
| WBsf379484 | 15388 | 15848 | ||||
| WBsf379528 | 28519 | 28882 | ||||
| WBsf380877 | 24127 | 27913 | ||||
| WBsf380999 | 28454 | 28837 | ||||
| WBsf381652 | 28133 | 28184 | ||||
| WBsf382298 | 24343 | 24578 | ||||
| WBsf382408 | 28496 | 28860 | ||||
| WBsf382415 | 10396 | 10751 | ||||
| WBsf382748 | 29178 | 29572 | ||||
| WBsf382869 | 12964 | 13038 | ||||
| WBsf383101 | 13922 | 14020 | ||||
| WBsf383172 | 20488 | 20489 | ||||
| WBsf383929 | 10326 | 10837 | ||||
| WBsf383947 | 28359 | 29491 | ||||
| WBsf384400 | 20309 | 20585 | ||||
| WBsf384410 | 13889 | 14281 | ||||
| WBsf384959 | 13667 | 13669 | ||||
| WBsf385153 | 12738 | 12797 | ||||
| WBsf385276 | 28091 | 28122 | ||||
| WBsf385474 | 28489 | 28763 | ||||
| WBsf386365 | 18201 | 18959 | ||||
| WBsf386722 | 18631 | 18776 | ||||
| WBsf387030 | 18364 | 18630 | ||||
| WBsf387508 | 18288 | 18726 | ||||
| WBsf387778 | 4316 | 4365 | ||||
| WBsf388173 | 28460 | 28782 | ||||
| WBsf388411 | 20294 | 20609 | ||||
| WBsf388547 | 10465 | 10703 | ||||
| WBsf389174 | 18558 | 18783 | ||||
| WBsf389220 | 14104 | 14304 | ||||
| WBsf389573 | 29357 | 29487 | ||||
| WBsf389605 | 15442 | 15809 | ||||
| WBsf389645 | 12807 | 13003 | ||||
| WBsf390021 | 28556 | 28812 | ||||
| WBsf390665 | 18365 | 18684 | ||||
| WBsf390846 | 16839 | 16869 | ||||
| WBsf390890 | 28641 | 28719 | ||||
| WBsf391051 | 28594 | 28705 | ||||
| WBsf046011 | 28517 | 29376 | ||||
| WBsf978597 | 32722 | 33091 | ||||
| WBsf644195 | 8380 | 8505 | ||||
| WBsf644196 | 20819 | 20846 | ||||
| WBsf644197 | 21017 | 21031 | ||||
| WBsf644198 | 28724 | 28728 | ||||
| WBsf650064 | 19963 | 19949 | ||||
| WBsf650065 | 20738 | 20689 | ||||
| WBsf654866 | 7718 | 7788 | ||||
| WBsf657160 | 16833 | 16927 | ||||
| WBsf657593 | 9309 | 9313 | ||||
| WBsf657594 | 21537 | 21554 | ||||
| WBsf657595 | 24598 | 24598 | ||||
| WBsf657596 | 26015 | 26015 | ||||
| WBsf657597 | 29391 | 29449 | ||||
| WBsf665531 | 19902 | 19894 | ||||
| WBsf676032 | 3983 | 4003 | ||||
| WBsf676033 | 4293 | 4348 | ||||
| WBsf676034 | 5039 | 5040 | ||||
| WBsf676035 | 5832 | 5879 | ||||
| WBsf676036 | 6187 | 6192 | ||||
| WBsf676037 | 13423 | 13458 | ||||
| WBsf676038 | 14304 | 14313 | ||||
| WBsf676039 | 14363 | 14363 | ||||
| WBsf676040 | 15567 | 15583 | ||||
| WBsf676041 | 15609 | 15661 | ||||
| WBsf676042 | 15710 | 15786 | ||||
| WBsf676043 | 17544 | 17544 | ||||
| WBsf676044 | 18411 | 18478 | ||||
| WBsf676045 | 18535 | 18556 | ||||
| WBsf676046 | 18663 | 18674 | ||||
| WBsf676047 | 18700 | 18723 | ||||
| WBsf697522 | 1980 | 1948 | ||||
| WBsf697523 | 3803 | 3782 | ||||
| WBsf697524 | 5598 | 5592 | ||||
| WBsf697525 | 6151 | 6104 | ||||
| WBsf697526 | 7692 | 7659 | ||||
| WBsf697527 | 8307 | 8284 | ||||
| WBsf697528 | 9221 | 9146 | ||||
| WBsf697529 | 12633 | 12633 | ||||
| WBsf697530 | 13340 | 13269 | ||||
| WBsf697531 | 15521 | 15469 | ||||
| WBsf697532 | 15607 | 15578 | ||||
| WBsf697533 | 16187 | 16172 | ||||
| WBsf697534 | 16334 | 16322 | ||||
| WBsf697535 | 16838 | 16721 | ||||
| WBsf697536 | 17429 | 17384 | ||||
| WBsf697537 | 17559 | 17537 | ||||
| WBsf697538 | 18326 | 18293 | ||||
| WBsf697539 | 18392 | 18388 | ||||
| WBsf697540 | 18669 | 18669 | ||||
| WBsf697541 | 19311 | 19311 | ||||
| WBsf697542 | 28630 | 28584 | ||||
| WBsf697543 | 34119 | 34119 | ||||
| WBsf716686 | 4174 | 4334 | ||||
| WBsf716985 | 13157 | 13593 | ||||
| WBsf716986 | 14079 | 14457 | ||||
| WBsf717668 | 19249 | 20103 | ||||
| WBsf265064 | 18509 | 18682 | ||||
| WBsf265065 | 21046 | 21106 | ||||
| WBsf267062 | 21917 | 22094 | ||||
| Feature_data | F56D1:Polysome | 1 | 36120 | |||
| F56D1:TranscriptionallyActiveRegion | 1 | 36120 | ||||
| F56D1:ChIPSeqTF | 1 | 36120 | ||||
| F56D1:TRF | 1 | 36120 | ||||
| F56D1:Dust | 1 | 36120 | ||||
| F56D1:inverted | 1 | 36120 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | F12A10 | 35121 | ||||
| Overlap_left | F07F6 | |||||
| Clone_left_end | F56D1 | 1 | ||||
| F12A10 | 23550 | |||||
| Clone_right_end | F07F6 | 11655 | ||||
| F56D1 | 36120 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081078 | ||
| NDB_ID | _U39997 | |||||
| NDB_SV | FO081078.1 | |||||
| Secondary_accession | U39997 | |||||
| DB_remark | The 5' clone is F07F6, 1200 bp overlap; the 3' clone is F12A10, 1000 bp overlap. Actual start of this clone is at base position 1 of F56D1; actual end is at 36120 of F56D1. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wilson R | ||||
| Chissoe S | ||||||
| Chissoe SL | ||||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 26 Aug 1994 00:00:00 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F56D1 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 9ab1b83be0b7b9a8e4f3fe0fb44673d8 | ||||
| Status | Finished | |||||
| Submitted | 26 Aug 1994 00:00:00 | |||||
| Map | Sequence-II | |||||
| Interpolated_map_position | II | -1.35911 | ||||
| Method | Genomic_canonical |
