WormBase Tree Display for CDS: F55F8.5
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F55F8.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F55F8 | |||
Structure | Source_exons | 1 | 92 | |||
136 | 233 | |||||
284 | 378 | |||||
430 | 536 | |||||
589 | 713 | |||||
765 | 859 | |||||
969 | 1290 | |||||
1345 | 1470 | |||||
1521 | 1653 | |||||
1718 | 1844 | |||||
DB_info | Database | SwissProt | UniProtAcc | P91343 | ||
UniProt | UniProtAcc | P91343 | ||||
UniProt_GCRP | UniProtAcc | P91343 | ||||
AlphaFold | entry | P91343 | ||||
NCBI_protein | GI_number | GI:351063673 | ||||
TREEFAM | TREEFAM_ID | TF313023 | ||||
Protein_id | CHROMOSOME_I | CCD71887 | 1 | |||
DB_remark | WDR-12 protein; contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat), PF08154 (NLE (NUC135) domain); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR012972 (NLE), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00018893 | ||||
Corresponding_transcript | F55F8.5.1 | |||||
Corresponding_protein | CE11196 | |||||
Corresponding_PCR_product | cenix:15-d3 | |||||
mv_F55F8.5 | ||||||
sjj_F55F8.5 | ||||||
Corresponding_oligo_set (21) | ||||||
Matching_cDNA (67) | ||||||
RNAi_result (12) | ||||||
Microarray_results (22) | ||||||
Brief_identification | Ribosome biogenesis protein WDR12 homolog | Accession_evidence | UniProt | SP:P91343 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf009506 | |||||
Method | curated |