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WormBase Tree Display for CDS: F54C1.7

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Name Class

F54C1.7SMapS_parentSequenceF54C1
StructureSource_exons13
72123
174280
688843
8941061
DB_infoDatabaseTrEMBLUniProtAccG5EF37
UniProtUniProtAccG5EF37
UniProt_GCRPUniProtAccG5EF37
AlphaFoldentryG5EF37
NCBI_proteinGI_numberGI:351059946
TREEFAMTREEFAM_IDTF318191
Protein_idCHROMOSOME_ICCD675491
DB_remarkPAT-10 protein; contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00003934
Corresponding_transcriptF54C1.7.1
F54C1.7.2
F54C1.7.3
F54C1.7.4
F54C1.7.5
F54C1.7.6
Corresponding_proteinCE11052
Corresponding_PCR_productWBPaper00038381:F54C1_1_1
cenix:87-f5
mv_BAA82523
sjj_F54C1.7
Corresponding_oligo_set (28)
Matching_cDNA (668)
RNAi_result (18)
Microarray_results (29)
Brief_identificationEF-hand domain-containing proteinAccession_evidenceUniProtTR:G5EF37
RNASeq_FPKM (74)
Methodcurated