WormBase Tree Display for CDS: F54C1.7
expand all nodes | collapse all nodes | view schema
F54C1.7 | SMap | S_parent | Sequence | F54C1 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 3 | |||
72 | 123 | |||||
174 | 280 | |||||
688 | 843 | |||||
894 | 1061 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5EF37 | ||
UniProt | UniProtAcc | G5EF37 | ||||
UniProt_GCRP | UniProtAcc | G5EF37 | ||||
AlphaFold | entry | G5EF37 | ||||
NCBI_protein | GI_number | GI:351059946 | ||||
TREEFAM | TREEFAM_ID | TF318191 | ||||
Protein_id | CHROMOSOME_I | CCD67549 | 1 | |||
DB_remark | PAT-10 protein; contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00003934 | ||||
Corresponding_transcript | F54C1.7.1 | |||||
F54C1.7.2 | ||||||
F54C1.7.3 | ||||||
F54C1.7.4 | ||||||
F54C1.7.5 | ||||||
F54C1.7.6 | ||||||
Corresponding_protein | CE11052 | |||||
Corresponding_PCR_product | WBPaper00038381:F54C1_1_1 | |||||
cenix:87-f5 | ||||||
mv_BAA82523 | ||||||
sjj_F54C1.7 | ||||||
Corresponding_oligo_set (28) | ||||||
Matching_cDNA (668) | ||||||
RNAi_result (18) | ||||||
Microarray_results (29) | ||||||
Brief_identification | EF-hand domain-containing protein | Accession_evidence | UniProt | TR:G5EF37 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |