WormBase Tree Display for CDS: F53F1.2
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F53F1.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F53F1 | |||
Structure | Source_exons | 1 | 204 | |||
288 | 531 | |||||
582 | 751 | |||||
802 | 891 | |||||
944 | 1129 | |||||
DB_info | Database | TrEMBL | UniProtAcc | P91997 | ||
UniProt | UniProtAcc | P91997 | ||||
UniProt_GCRP | UniProtAcc | P91997 | ||||
AlphaFold | entry | P91997 | ||||
NCBI_protein | GI_number | GI:3877459 | ||||
TREEFAM | TREEFAM_ID | TF315922 | ||||
Protein_id | CHROMOSOME_V | CAB03127 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00248 (Aldo/keto reductase family); contains similarity to Interpro domains IPR036812 (NADP-dependent oxidoreductase domain superfamily), IPR020471 (Aldo-keto reductase), IPR023210 (NADP-dependent oxidoreductase domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00009980 | ||||
Corresponding_transcript | F53F1.2.1 | |||||
Corresponding_protein | CE10934 | |||||
Corresponding_PCR_product | cenix:20-d3 | |||||
mv_F53F1.2 | ||||||
sjj_F53F1.2 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (47) | ||||||
RNAi_result | WBRNAi00025588 | |||||
WBRNAi00081657 | ||||||
WBRNAi00008835 | ||||||
WBRNAi00032695 | ||||||
WBRNAi00048132 | ||||||
WBRNAi00092619 | ||||||
Microarray_results (18) | ||||||
Brief_identification | NADP-dependent oxidoreductase domain-containing protein | Accession_evidence | UniProt | TR:P91997 | ||
RNASeq_FPKM (74) | ||||||
Remark | [dl 970313] Prosite signature for aldoketo reductase (PS00062 & PS00063) | Curator_confirmed | WBPerson1846 | |||
Method | curated |