WormBase Tree Display for CDS: F49D11.6
expand all nodes | collapse all nodes | view schema
F49D11.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F49D11 | |||
Structure | Source_exons | 1 | 136 | |||
188 | 234 | |||||
3582 | 3724 | |||||
3775 | 3909 | |||||
4410 | 4547 | |||||
4723 | 4880 | |||||
5188 | 5375 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O44721 | ||
UniProt | UniProtAcc | O44721 | ||||
UniProt_GCRP | UniProtAcc | O44721 | ||||
AlphaFold | entry | O44721 | ||||
NCBI_protein | GI_number | GI:373219994 | ||||
TREEFAM | TREEFAM_ID | TF316032 | ||||
Protein_id | CHROMOSOME_I | CCD71539 | 1 | |||
DB_remark | contains similarity to Pfam domain PF03567 (Sulfotransferase family); contains similarity to Interpro domains IPR005331 (Sulfotransferase), IPR007669 (Carbohydrate sulfotransferase Chst-1) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00018630 | ||||
Corresponding_transcript | F49D11.6.1 | |||||
Corresponding_protein | CE44140 | |||||
Corresponding_PCR_product | cenix:96-g9 | |||||
mv_F49D11.6 | ||||||
sjj_F49D11.6 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (13) | ||||||
RNAi_result | WBRNAi00047826 | |||||
WBRNAi00003727 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Carbohydrate sulfotransferase | Accession_evidence | UniProt | TR:O44721 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |