WormBase Tree Display for CDS: F48F7.1b
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F48F7.1b | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_X | ||
Structure | Source_exons | 1 | 34 | ||
1774 | 2012 | ||||
2115 | 2287 | ||||
2434 | 2604 | ||||
2658 | 4120 | ||||
4176 | 5128 | ||||
5181 | 5219 | ||||
DB_info | Database | TrEMBL | UniProtAcc | G5EES3 | |
UniProt | UniProtAcc | G5EES3 | |||
UniProt_GCRP | UniProtAcc | G5EES3 | |||
AlphaFold | entry | G5EES3 | |||
NCBI_protein | GI_number | GI:211970427 | |||
TREEFAM | TREEFAM_ID | TF101510 | |||
Protein_id | CHROMOSOME_X | CAR97837 | 1 | ||
DB_remark | ALG-1 protein; contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain), PF08699 (Argonaute linker 1 domain), PF16486 (N-terminal domain of argonaute), PF16487 (Mid domain of argonaute), PF16488 (Argonaute linker 2 domain); contains similarity to Interpro domains IPR032473 (Protein argonaute, Mid domain), IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR014811 (Argonaute, linker 1 domain), IPR003165 (Piwi domain), IPR032474 (Protein argonaute, N-terminal), IPR032472 (Argonaute linker 2 domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Protein_id_evidence | BP:CBP34697 | |||
Visible (12) | |||||
Method | curated |