WormBase Tree Display for Sequence: F48F5
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| F48F5 | DNA | F48F5 | 31668 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00005147 | 28864 | 31240 | |
| WBGene00303059 | 95 | 142 | ||||
| WBGene00305422 | 53 | 2621 | ||||
| WBGene00001406 | 54 | 6050 | ||||
| WBGene00219957 | 14386 | 14512 | ||||
| WBGene00009846 | 21230 | 14985 | ||||
| WBGene00009848 | 27937 | 23023 | ||||
| CDS_child (134) | ||||||
| Transcript (11) | ||||||
| Pseudogene | F48F5.2 | 21230 | 14985 | |||
| PCR_product (13) | ||||||
| Allele (726) | ||||||
| Oligo_set | Aff_F48F5.1 | 15733 | 14985 | |||
| Aff_F48F5.2 | 21230 | 20508 | ||||
| Aff_F48F5.3 | 27937 | 27683 | ||||
| Aff_F48F5.4 | 30073 | 31186 | ||||
| Feature_object (132) | ||||||
| Feature_data | F48F5:Polysome | 1 | 31668 | |||
| F48F5:TranscriptionallyActiveRegion | 1 | 31668 | ||||
| F48F5:ChIPSeqTF | 1 | 31668 | ||||
| F48F5:TRF | 1 | 31668 | ||||
| F48F5:Dust | 1 | 31668 | ||||
| F48F5:inverted | 1 | 31668 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | B0250 | 31569 | ||||
| Overlap_left | F53H2 | |||||
| Clone_left_end | B0250 | 29450 | ||||
| Clone_right_end | F53H2 | 100 | ||||
| F48F5 | 31668 | |||||
| DB_info | Database | EMBL | NDB_AC | Z81541 | ||
| NDB_SV | Z81541.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Lloyd CR | ||||
| From_laboratory | HX | |||||
| Date_directory | 980402 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F48F5 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | cb74dbc40bb87f56f2177700c16d3261 | ||||
| Status | Finished | 02 Apr 1998 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 11540 | ||
| Right | 11556 | |||||
| Interpolated_map_position | V | 24.9941 | ||||
| Assembly_tags | Finished Left | 4 | 1 | F48F5 | ||
| Clone right end | 100 | 97 | F53H2 | |||
| 31668 | 31665 | F48F5 | ||||
| Clone left end | 29450 | 29453 | B0250 | |||
| Finished Right | 31668 | 31665 | F48F5 | |||
| annotation | 13131 | 8153 | [x] Tandem repeat [ ] Single clone region [x] Forced join [ ] Other Comment Region consisting of 180bp tandem rpt. Restriction digest data (xmni, hincii) suggest 1 copy of the repeat is missing from this assembly. | |||
| Method | Genomic_canonical |
