WormBase Tree Display for CDS: F43C1.4
expand all nodes | collapse all nodes | view schema
F43C1.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F43C1 | ||
Structure | Source_exons | 1 | 199 | ||
476 | 652 | ||||
774 | 862 | ||||
1005 | 1065 | ||||
1171 | 1328 | ||||
1481 | 1800 | ||||
2105 | 2220 | ||||
2269 | 2426 | ||||
2485 | 2580 | ||||
DB_info | Database | SwissProt | UniProtAcc | Q09565 | |
UniProt | UniProtAcc | Q09565 | |||
UniProt_GCRP | UniProtAcc | Q09565 | |||
AlphaFold | entry | Q09565 | |||
NCBI_protein | GI_number | GI:14530435 | |||
TREEFAM | TREEFAM_ID | TF321941 | |||
Protein_id | CHROMOSOME_III | CAA87058 | 2 | ||
DB_remark | NHR-20 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (12) | |||||
Associated_feature | WBsf009172 | ||||
Method | curated |