WormBase Tree Display for Sequence: F42G2
expand all nodes | collapse all nodes | view schema
F42G2 | DNA | F42G2 | 37409 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (11) | ||||
CDS_child (229) | ||||||
Transcript (15) | ||||||
Pseudogene | F42G2.t1 | 33847 | 33912 | |||
PCR_product (21) | ||||||
Allele (1608) | ||||||
Oligo_set | Aff_F42G2.1 | 35760 | 37195 | |||
Aff_F42G2.2 | 15484 | 16129 | ||||
Aff_F42G2.3 | 10816 | 11465 | ||||
Aff_F42G2.4 | 1162 | 508 | ||||
Aff_F42G2.5 | 8132 | 7207 | ||||
Aff_F42G2.6 | 18083 | 17255 | ||||
Feature_object | WBsf986938 | 13531 | 13681 | |||
WBsf986939 | 25331 | 25481 | ||||
WBsf986940 | 26451 | 26601 | ||||
WBsf986941 | 27691 | 27841 | ||||
WBsf986942 | 31191 | 31341 | ||||
WBsf986943 | 33131 | 33281 | ||||
WBsf1011708 | 31171 | 31321 | ||||
WBsf000351 | 13002 | 13003 | ||||
WBsf020421 | 8775 | 8774 | ||||
WBsf023051 | 3544 | 3543 | ||||
WBsf039396 | 1743 | 3536 | ||||
WBsf039397 | 13009 | 16128 | ||||
WBsf062786 | 4972 | 4972 | ||||
WBsf063151 | 420 | 420 | ||||
WBsf063152 | 8132 | 8132 | ||||
WBsf063777 | 11561 | 11561 | ||||
WBsf063778 | 19125 | 19125 | ||||
WBsf064509 | 5579 | 5579 | ||||
WBsf065381 | 13904 | 13904 | ||||
WBsf066790 | 735 | 735 | ||||
WBsf066899 | 5049 | 5049 | ||||
WBsf125046 | 20742 | 20741 | ||||
WBsf147395 | 6272 | 6271 | ||||
WBsf147507 | 13854 | 13855 | ||||
WBsf148266 | 5049 | 5049 | ||||
WBsf148604 | 420 | 420 | ||||
WBsf148605 | 8132 | 8132 | ||||
WBsf149482 | 4972 | 4972 | ||||
WBsf150719 | 1427 | 1427 | ||||
WBsf150720 | 17255 | 17255 | ||||
WBsf151791 | 2568 | 2568 | ||||
WBsf151792 | 5591 | 5591 | ||||
WBsf151793 | 8152 | 8152 | ||||
WBsf152644 | 5579 | 5579 | ||||
WBsf153338 | 8342 | 8342 | ||||
WBsf153906 | 5678 | 5678 | ||||
WBsf155205 | 8489 | 8489 | ||||
WBsf155819 | 735 | 735 | ||||
WBsf155972 | 19125 | 19125 | ||||
WBsf220929 | 11466 | 11590 | ||||
WBsf222764 | 507 | 432 | ||||
WBsf222765 | 5011 | 4985 | ||||
WBsf222766 | 17282 | 17167 | ||||
WBsf242026 | 390 | 389 | ||||
WBsf242027 | 1289 | 1288 | ||||
WBsf242028 | 17169 | 17168 | ||||
WBsf244364 | 6793 | 6792 | ||||
WBsf245077 | 16208 | 16209 | ||||
WBsf245396 | 4915 | 4914 | ||||
WBsf245397 | 4984 | 4983 | ||||
WBsf271138 | 4976 | 4975 | ||||
WBsf272409 | 425 | 424 | ||||
WBsf609383 | 11590 | 11591 | ||||
WBsf610227 | 16192 | 16193 | ||||
WBsf612336 | 429 | 428 | ||||
WBsf613387 | 407 | 406 | ||||
WBsf613460 | 6881 | 6880 | ||||
WBsf614761 | 4944 | 4943 | ||||
WBsf952840 | 3544 | 3543 | ||||
WBsf952841 | 6272 | 6271 | ||||
WBsf952842 | 8743 | 8742 | ||||
WBsf952843 | 9367 | 9368 | ||||
WBsf952844 | 11350 | 11351 | ||||
WBsf952845 | 11922 | 11923 | ||||
WBsf952846 | 13002 | 13003 | ||||
WBsf952847 | 19740 | 19741 | ||||
WBsf952848 | 20582 | 20581 | ||||
WBsf952849 | 20814 | 20813 | ||||
WBsf952850 | 20822 | 20821 | ||||
WBsf952851 | 22179 | 22178 | ||||
WBsf952852 | 30254 | 30255 | ||||
WBsf341621 | 33128 | 33467 | ||||
WBsf343037 | 11383 | 12647 | ||||
WBsf343472 | 6322 | 6601 | ||||
WBsf343954 | 26251 | 26850 | ||||
WBsf344137 | 32374 | 33592 | ||||
WBsf344357 | 27525 | 27984 | ||||
WBsf344892 | 25258 | 25466 | ||||
WBsf345900 | 11507 | 12465 | ||||
WBsf345934 | 32596 | 33484 | ||||
WBsf345969 | 12808 | 14501 | ||||
WBsf345979 | 6249 | 6929 | ||||
WBsf346435 | 29043 | 29416 | ||||
WBsf346573 | 8786 | 9032 | ||||
WBsf346751 | 27669 | 27884 | ||||
WBsf346756 | 16210 | 16386 | ||||
WBsf347261 | 3637 | 3772 | ||||
WBsf347289 | 30467 | 30510 | ||||
WBsf348299 | 18229 | 18331 | ||||
WBsf348401 | 24266 | 24308 | ||||
WBsf350279 | 30304 | 30306 | ||||
WBsf351161 | 32351 | 33613 | ||||
WBsf351194 | 27482 | 27958 | ||||
WBsf351880 | 6293 | 6646 | ||||
WBsf352475 | 26278 | 26691 | ||||
WBsf352926 | 13116 | 13775 | ||||
WBsf353232 | 31225 | 31383 | ||||
WBsf353248 | 11471 | 11793 | ||||
WBsf353563 | 28818 | 29430 | ||||
WBsf353616 | 8626 | 9052 | ||||
WBsf355179 | 29692 | 30341 | ||||
WBsf355450 | 32414 | 33598 | ||||
WBsf355683 | 26441 | 26865 | ||||
WBsf355706 | 27543 | 27946 | ||||
WBsf357795 | 6225 | 6548 | ||||
WBsf358497 | 33062 | 33461 | ||||
WBsf358910 | 12166 | 12369 | ||||
WBsf359070 | 6341 | 6540 | ||||
WBsf359081 | 25299 | 25351 | ||||
WBsf359769 | 6259 | 6600 | ||||
WBsf359823 | 11522 | 12421 | ||||
WBsf360031 | 8740 | 9036 | ||||
WBsf360075 | 32504 | 32877 | ||||
WBsf360186 | 29027 | 29319 | ||||
WBsf360850 | 13391 | 13634 | ||||
WBsf361651 | 11438 | 11800 | ||||
WBsf361736 | 13178 | 13667 | ||||
WBsf361940 | 28616 | 28638 | ||||
WBsf363090 | 6283 | 6877 | ||||
WBsf363332 | 27703 | 28245 | ||||
WBsf364900 | 29856 | 30141 | ||||
WBsf366315 | 33121 | 33403 | ||||
WBsf370902 | 32803 | 33558 | ||||
WBsf371282 | 11920 | 12261 | ||||
WBsf371489 | 6312 | 6493 | ||||
WBsf371543 | 33816 | 33905 | ||||
WBsf371735 | 29586 | 29888 | ||||
WBsf373963 | 6192 | 6679 | ||||
WBsf374413 | 32535 | 33389 | ||||
WBsf374581 | 11554 | 12354 | ||||
WBsf374613 | 8665 | 9070 | ||||
WBsf376093 | 33030 | 33407 | ||||
WBsf376264 | 6250 | 6572 | ||||
WBsf377134 | 6323 | 6550 | ||||
WBsf377577 | 31728 | 32058 | ||||
WBsf378897 | 6249 | 6635 | ||||
WBsf379975 | 31230 | 31452 | ||||
WBsf380616 | 6277 | 6568 | ||||
WBsf386356 | 32953 | 33380 | ||||
WBsf387868 | 33254 | 33281 | ||||
WBsf388414 | 11539 | 12298 | ||||
WBsf388515 | 6124 | 6655 | ||||
WBsf388702 | 29049 | 29315 | ||||
WBsf388729 | 32780 | 33436 | ||||
WBsf389039 | 8812 | 9223 | ||||
WBsf389472 | 30196 | 30342 | ||||
WBsf389475 | 25306 | 25446 | ||||
WBsf389741 | 24946 | 24996 | ||||
WBsf045908 | 22696 | 23297 | ||||
WBsf644010 | 10211 | 10305 | ||||
WBsf649928 | 6342 | 6327 | ||||
WBsf649929 | 33146 | 33118 | ||||
WBsf657387 | 11247 | 11253 | ||||
WBsf657388 | 13185 | 13240 | ||||
WBsf657389 | 13733 | 13752 | ||||
WBsf657390 | 14038 | 14038 | ||||
WBsf665396 | 3363 | 3343 | ||||
WBsf665397 | 5592 | 5531 | ||||
WBsf675507 | 6401 | 6429 | ||||
WBsf675508 | 6485 | 6544 | ||||
WBsf675509 | 11705 | 11727 | ||||
WBsf675510 | 22837 | 22941 | ||||
WBsf675511 | 24236 | 24247 | ||||
WBsf675512 | 24379 | 24385 | ||||
WBsf675513 | 26591 | 26630 | ||||
WBsf675514 | 27825 | 27879 | ||||
WBsf675515 | 30055 | 30074 | ||||
WBsf675516 | 30644 | 30655 | ||||
WBsf675517 | 31379 | 31420 | ||||
WBsf675518 | 32201 | 32248 | ||||
WBsf696927 | 12137 | 12077 | ||||
WBsf696928 | 22877 | 22768 | ||||
WBsf696929 | 24163 | 24133 | ||||
WBsf696930 | 27695 | 27695 | ||||
WBsf696931 | 32145 | 32145 | ||||
WBsf696932 | 32599 | 32599 | ||||
WBsf696933 | 32668 | 32661 | ||||
WBsf716514 | 33121 | 33380 | ||||
WBsf716973 | 26441 | 26850 | ||||
WBsf717634 | 29692 | 30341 | ||||
WBsf717635 | 31230 | 31452 | ||||
Feature_data | F42G2:Polysome | 1 | 37409 | |||
F42G2:TranscriptionallyActiveRegion | 1 | 37409 | ||||
F42G2:ChIPSeqTF | 1 | 37409 | ||||
F42G2:TRF | 1 | 37409 | ||||
F42G2:Dust | 1 | 37409 | ||||
F42G2:inverted | 1 | 37409 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_II | |||
Overlap_right | T22D2 | 34010 | ||||
Overlap_left | F30D4 | |||||
Clone_left_end | F42G2 | 1 | ||||
T22D2 | 14206 | |||||
Clone_right_end | F30D4 | 24154 | ||||
F42G2 | 37409 | |||||
DB_info | Database | EMBL | NDB_AC | FO081261 | ||
NDB_ID | _AF024499 | |||||
NDB_SV | FO081261.1 | |||||
Secondary_accession | AF024499 | |||||
DB_remark | The 5' clone is F30D4, 200 bp overlap; the 3' clone is T22D2, 3400 bp overlap. Actual start of this clone is at base position 1 of F42G2; actual end is at 37409 of F42G2. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Scheet P | ||||
Maggi L | ||||||
From_laboratory | RW | |||||
Date | 19 Jun 1997 00:00:00 | |||||
Date_directory | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | F42G2 | ||||
Remark | [20020429 db] added 1 bp ("G") at 17398 | |||||
[20030612 db] added 1 bp ("C") at 37363 | ||||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 1850ab51decb2b24af77d75b0de2994b | ||||
Status | Finished | |||||
Submitted | 19 Jun 1997 00:00:00 | |||||
Map | Sequence-II | |||||
Interpolated_map_position | II | -13.8161 | ||||
Method | Genomic_canonical |