WormBase Tree Display for CDS: F38B6.5b
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| F38B6.5b | SMap | S_parent | Sequence | F38B6 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 84 | |||
| 184 | 426 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q7YZV5 | ||
| UniProt | UniProtAcc | Q7YZV5 | ||||
| AlphaFold | entry | Q7YZV5 | ||||
| NCBI_protein | GI_number | GI:373219481 | ||||
| Protein_id | CHROMOSOME_X | CCD68213 | 1 | |||
| DB_remark | COL-172 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies)); contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AU198870 | |||
| Visible | Gene | WBGene00000745 | ||||
| Corresponding_transcript | F38B6.5b.1 | |||||
| F38B6.5b.2 | ||||||
| F38B6.5b.3 | ||||||
| Corresponding_protein | CE34552 | |||||
| Corresponding_PCR_product | cenix:60-g8 | |||||
| mv_F38B6.5 | ||||||
| sjj_F38B6.5 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (18) | ||||||
| RNAi_result | WBRNAi00014544 | |||||
| WBRNAi00031950 | ||||||
| WBRNAi00046689 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Collagen triple helix repeat protein | Accession_evidence | UniProt | TR:Q7YZV5 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
