WormBase Tree Display for CDS: F32A5.4a
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| F32A5.4a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F32A5 | ||
| Structure | Source_exons | 1 | 228 | ||
| 646 | 849 | ||||
| 952 | 1077 | ||||
| 1127 | 1300 | ||||
| DB_info | Database | SwissProt | UniProtAcc | Q19948 | |
| UniProtIsoformAcc | Q19948-1 | ||||
| UniProt | UniProtAcc | Q19948 | |||
| UniProt_GCRP | UniProtAcc | Q19948 | |||
| AlphaFold | entry | Q19948 | |||
| NCBI_protein | GI_number | GI:351065121 | |||
| TREEFAM | TREEFAM_ID | TF317000 | |||
| Protein_id | CHROMOSOME_II | CCD66274 | 1 | ||
| DB_remark | contains similarity to Pfam domain PF06394 (Pepsin inhibitor-3-like repeated domain); contains similarity to Interpro domains IPR010480 (Pepsin inhibitor-3-like repeated domain), IPR038412 (Pepsin inhibitor-3 domain superfamily) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ758970 | ||
| Visible | Gene | WBGene00017970 | |||
| Corresponding_transcript | F32A5.4a.1 | ||||
| Corresponding_protein | CE01274 | ||||
| Corresponding_PCR_product | cenix:27-a6 | ||||
| mv_F32A5.4 | |||||
| sjj_F32A5.4 | |||||
| Corresponding_oligo_set (20) | |||||
| Matching_cDNA | male_Nanopore_Roach_107901 | Inferred_automatically | transcript_builder.pl | ||
| male_Nanopore_Roach_157952 | |||||
| young_adult_Nanopore_Roach_86397 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_131720 | |||||
| L3_Nanopore_Roach_98815 | |||||
| L4_Nanopore_Roach_43800 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_10921 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_64223 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_42509 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_67881 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_14888 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_36242 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_15241 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_69769 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_69778 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_68307 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_104250 | |||||
| L4_Nanopore_Roach_68564 | |||||
| yk442c10.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1521b02.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1632c02.3 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_57110 | Inferred_automatically | transcript_builder.pl | |||
| OSTF115E5_1 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_98556 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG7265|c1_g1_i2 | Inferred_automatically | transcript_builder.pl | |||
| OSTR115E5_1 | Inferred_automatically | transcript_builder.pl | |||
| FN877775 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_126667 | Inferred_automatically | transcript_builder.pl | |||
| yk442c10.5 | Inferred_automatically | transcript_builder.pl | |||
| CK575523 | Inferred_automatically | transcript_builder.pl | |||
| yk1521b02.5 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_111348 | Inferred_automatically | transcript_builder.pl | |||
| yk1632c02.5 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_7542 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_123712 | Inferred_automatically | transcript_builder.pl | |||
| yk1468f04.5 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_9155 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_189822 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_95903 | Inferred_automatically | transcript_builder.pl | |||
| FN877776 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00014194 | ||||
| WBRNAi00031644 | |||||
| WBRNAi00046076 | |||||
| Microarray_results (22) | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 05 Nov 2002 00:00:00 | WBPerson1867 | |||
| Associated_feature | WBsf016068 | ||||
| Method | curated |
