WormBase Tree Display for CDS: F28G4.1
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| F28G4.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F28G4 | |||
| Structure | Source_exons | 1 | 391 | |||
| 664 | 758 | |||||
| 812 | 963 | |||||
| 1014 | 1318 | |||||
| 1361 | 1597 | |||||
| 1946 | 2295 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17851 | ||
| UniProt | UniProtAcc | O17851 | ||||
| UniProt_GCRP | UniProtAcc | O17851 | ||||
| AlphaFold | entry | O17851 | ||||
| NCBI_protein | GI_number | GI:3876517 | ||||
| TREEFAM | TREEFAM_ID | TF352044 | ||||
| Protein_id | CHROMOSOME_V | CAB07604 | 1 | |||
| DB_remark | CYP-37B1 protein; contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009226 | ||||
| Corresponding_transcript | F28G4.1.1 | |||||
| Corresponding_protein | CE15919 | |||||
| Corresponding_PCR_product | cenix:67-g3 | |||||
| mv_F28G4.1 | ||||||
| sjj2_F28G4.1 | ||||||
| sjj_F28G4.1 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | male_Nanopore_Roach_102238 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_80368 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_40664 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_921 | ||||||
| L1_Nanopore_Roach_63041 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_2039 | ||||||
| male_Nanopore_Roach_140 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_59882 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_137 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_1091 | ||||||
| adult_Nanopore_Roach_64791 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_3818 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_17815 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR186D3_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_88749 | Inferred_automatically | transcript_builder.pl | ||||
| yk1348d12.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk1111a03.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk1287c01.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1087g01.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1289h11.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk1165a02.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1348d12.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1004f08.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_102773 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF186D3_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_3736 | Inferred_automatically | transcript_builder.pl | ||||
| yk859c12.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_3109 | Inferred_automatically | transcript_builder.pl | ||||
| yk1087g01.5 | Inferred_automatically | transcript_builder.pl | ||||
| FN891513 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_173 | Inferred_automatically | transcript_builder.pl | ||||
| yk1111a03.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1289h11.3 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00014068 | |||||
| WBRNAi00114816 | ||||||
| WBRNAi00045860 | ||||||
| WBRNAi00092693 | ||||||
| WBRNAi00031540 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Cytochrome P450 | Accession_evidence | UniProt | TR:O17851 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
