WormBase Tree Display for CDS: F27D9.1a
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F27D9.1a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F27D9 | |||
Structure | Source_exons | 1 | 28 | |||
93 | 221 | |||||
273 | 364 | |||||
415 | 588 | |||||
635 | 774 | |||||
842 | 1106 | |||||
1176 | 1703 | |||||
1786 | 1961 | |||||
2062 | 2305 | |||||
DB_info | Database | SwissProt | UniProtAcc | P34815 | ||
UniProt | UniProtAcc | P34815 | ||||
UniProt_GCRP | UniProtAcc | P34815 | ||||
AlphaFold | entry | P34815 | ||||
NCBI_protein | GI_number | GI:351060281 | ||||
Protein_id | CHROMOSOME_X | CCD67914 | 1 | |||
DB_remark | UNC-18 protein; contains similarity to Pfam domain PF00995 (Sec1 family); contains similarity to Interpro domains IPR001619 (Sec1-like protein), IPR043127 (Sec1-like, domain 3a), IPR043154 (Sec1-like, domain 1), IPR036045 (Sec1-like superfamily), IPR027482 (Sec1-like, domain 2) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | S66176 | |||
Visible | Gene | WBGene00006757 | ||||
Corresponding_transcript | F27D9.1a.1 | |||||
Corresponding_protein | CE24927 | |||||
Corresponding_PCR_product | cenix:71-h9 | |||||
mv_AAB21818 | ||||||
mv_AAB28570 | ||||||
sjj_F27D9.1 | ||||||
Corresponding_oligo_set (25) | ||||||
Matching_cDNA (72) | ||||||
RNAi_result (21) | ||||||
Microarray_results (29) | ||||||
Brief_identification | Acetylcholine regulator unc-18 | Accession_evidence | UniProt | SP:P34815 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 19 Jan 2016 10:46:04 | WBPerson1983 | ||||
Remark | [991210 db] made new first exon based on GenBank entry (AAB28570.1) | Curator_confirmed | WBPerson1848 | |||
Associated_feature | WBsf000805 | |||||
Method | curated |