WormBase Tree Display for Sequence: F27C8

F27C8 DNA: F27C8 33837
  SMap: S_child: Gene_child (12)
      CDS_child: F27C8.1 26053 23793
        F27C8.2 21507 23038
        F27C8.2:wp92 21507 23038
        F27C8.2:wp243 21507 23038
        F27C8.3 20212 19915
        F27C8.3:wp169 20097 19337
        F27C8.4a 18086 18702
        F27C8.4b 18254 18702
        F27C8.5 16825 14231
        F27C8.5:wp57 17291 14231
        F27C8.6 13133 11628
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g16n11_x20_IV_m 13136 11631
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g5_x20_IV_p 18083 18699
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g125_x20_IV_m 15041 14915
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g134_x20_IV_m 14574 14477
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g72n11_x20_IV_m 26053 23796
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g144_x20_IV_m 25576 25224
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g112_x20_IV_m 24654 24457
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g170_x20_IV_p 18427 18504
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g102_x20_IV_m 24172 23796
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g173_x20_IV_p 22194 22399
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g94n11_x20_IV_m 4411 756
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g95_x20_IV_m 13136 11631
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g110_x20_IV_p 18083 18235
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g151_x20_IV_m 11717 11637
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g98n11_x20_IV_m 26053 24475
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g133_x20_IV_m 13136 12696
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g37_x20_IV_p 18083 18696
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g114_x20_IV_m 24172 23796
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g110_x20_IV_m 12107 12042
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g161_x20_IV_m 12875 12750
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g136_x20_IV_m 25307 25206
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g9_x20_IV_p 18083 18696
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g89_x20_IV_m 24172 23921
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g117_x20_IV_m 11969 11631
        RNASEQ_embryo_him-8_20dC_post-L1_g23n11_x20_IV_m 13136 11631
        RNASEQ_embryo_him-8_20dC_post-L1_g133_x20_IV_p 22433 22729
        RNASEQ_embryo_him-8_20dC_post-L1_g43_x20_IV_p 18083 18696
        RNASEQ_embryo_him-8_20dC_post-L1_g38n11_x20_IV_m 26053 23796
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g26_x20_IV_m 16825 14234
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g180_x20_IV_p 22703 22849
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3_x20_IV_p 18083 18699
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g76n11_x20_IV_m 26053 23796
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g205_x20_IV_p 22092 22189
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g49n11_x20_IV_m 13136 11631
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g187_x20_IV_p 22389 22583
        RNASEQ_L4_soma_JK1107_no_DNaseI_g73n11_x20_IV_m 13136 12042
        RNASEQ_L4_soma_JK1107_no_DNaseI_g10_x20_IV_p 18083 18699
        RNASEQ_L4_soma_JK1107_no_DNaseI_g168_x20_IV_p 22640 22726
        RNASEQ_L4_soma_JK1107_no_DNaseI_g152_x20_IV_p 22428 22619
        RNASEQ_L4_soma_JK1107_no_DNaseI_g171_x20_IV_p 22048 22172
        RNASEQ_L4_soma_JK1107_no_DNaseI_g61n11_x20_IV_m 26053 23796
        RNASEQ_L4_soma_JK1107_no_DNaseI_g115_x20_IV_m 11717 11640
        RNASEQ_L4_soma_JK1107_no_DNaseI_g179_x20_IV_p 22194 22339
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g53n11_x20_IV_m 830 756
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g126_x20_IV_m 24654 23796
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g148_x20_IV_p 22598 22840
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g71e9k85_x20_IV_m 4411 756
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g58_x20_IV_m 12242 11631
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g130_x20_IV_p 22048 22459
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g14_x20_IV_p 18083 18699
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g108n11_x20_IV_m 26053 25066
        RNASEQ_early_embryo_g16n11_x20t1_IV_m 13136 11631
        RNASEQ_early_embryo_g92_x20_IV_p 22048 22981
        RNASEQ_early_embryo_g57n11_x20_IV_m 26053 23796
        RNASEQ_early_embryo_g81_x20_IV_p 18083 18699
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58_x20_IV_p 18083 18699
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g35n11_x20t1_IV_m 26053 23796
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g82_x20_IV_p 22048 23035
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g79n11_x20_IV_m 13136 11631
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g69n11_x20t1_IV_m 26053 23796
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g92n11e6k75_x20t1_IV_m 4411 756
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g11_x20_IV_p 18083 18699
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g121_x20_IV_p 22048 23035
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g90n11e5k75_x20t1_IV_m 830 756
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g109_x20t1_IV_m 12650 11631
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g46n11_x20_IV_m 26053 23796
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g128_x20_IV_p 22889 23035
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g127_x20_IV_p 22194 22444
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g6_x20_IV_p 18083 18699
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g109_x20_IV_m 15372 14252
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g139_x20_IV_m 16243 15779
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g94n11_x20_IV_m 13136 11631
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g156_x20_IV_p 21845 21967
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g56n11_x20_IV_m 26053 23796
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g19_x20_IV_p 18083 18699
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g130_x20_IV_p 22048 22909
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g38n11_x20_IV_m 13136 11631
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g57_x20_IV_m 16825 14234
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g19_x20t1_IV_p 18083 18699
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g70n11_x20_IV_m 26053 23796
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g240_x20_IV_m 16198 16127
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g88n11_x20_IV_m 26053 24559
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g159_x20_IV_m 24085 23921
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g22_x20_IV_p 18083 18699
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g239_x20_IV_m 24492 24161
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g48n11_x20_IV_p 18254 18278
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g160_x20_IV_m 16825 16691
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g44n11_x20_IV_m 13136 11631
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g9n11_x20_IV_m 12881 12100
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g241_x20_IV_m 15276 15114
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g158_x20_IV_m 4411 801
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g130_x20_IV_m 25576 25209
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g21n11_x20_IV_m 13136 12100
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g198_x20_IV_m 16895 16815
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g180_x20_IV_m 14574 14477
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g122_x20_IV_m 25107 24727
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g146_x20_IV_m 24165 24109
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g26_x20_IV_p 18083 18699
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g131_x20_IV_m 23931 23807
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g43n11_x20_IV_m 12881 11631
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g2_x20t1_IV_p 18083 18699
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11_x20_IV_m 13136 11631
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g68n11_x20_IV_m 26053 23796
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11_x20t1_IV_p 18254 18278
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g26n11_x20_IV_m 13136 11631
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g128_x20_IV_m 25241 24718
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g19n11_x20_IV_p 18254 18699
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g6_x20_IV_p 18083 18278
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g101n11_x20_IV_m 26053 25251
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g160_x20_IV_m 23995 23826
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g154_x20_IV_m 24474 24059
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g88_x20_IV_m 16825 14234
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g221_x20_IV_p 21932 22006
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g126_x20_IV_m 23931 23624
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g26_x20t1_IV_p 18083 18699
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g115_x20_IV_m 24654 24463
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g7n11_x20t1_IV_m 13136 11631
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g110_x20_IV_m 25936 25284
        F27C8.gc1 13133 11628
        F27C8.gc2 17074 14231
        F27C8.gc3 18083 18702
        F27C8.gc4 20097 18782
        F27C8.gc5 21588 23038
        F27C8.gc6 26053 23793
        ContigIV.elegans.jigsaw.1860.mRNA1860 13136 11455
        ContigIV.elegans.jigsaw.1862.mRNA1862 18074 18786
        ContigIV.elegans.jigsaw.1863.mRNA1863 20273 18916
        ContigIV.elegans.jigsaw.1861.mRNA1861 18361 14034
        ContigIV.elegans.jigsaw.1865.mRNA1865 26103 23477
        ContigIV.elegans.jigsaw.1864.mRNA1864 21444 23655
        AG1201_F27C8.6.T1 13136 11628
        AG1201_F27C8.6.T2 13136 11628
        AG1201_F27C8.5.T2 16825 14231
        AG1201_F27C8.5.T1 16825 15469
        AG1201_F27C8.4.T2 18083 18702
        AG1201_F27C8.4.T1 18254 18702
        AG1201_F27C8.3.T1 20212 19915
        AG1201_RIT4P.1922.T1 20864 20956
        AG1201_F27C8.2.T6 21507 23038
        AG1201_F27C8.2.T5 22048 22927
        AG1201_F27C8.2.T1 22048 23038
        AG1201_F27C8.1.T1 26053 23793
      Transcript (13)
      Nongenomic: yk377d4 14239 16827
      PCR_product (22)
      Allele (364)
      Oligo_set: Aff_F27C8.1 24633 23793
        Aff_F27C8.2 22000 23038
        Aff_F27C8.3 20097 19337
        Aff_F27C8.4 18086 18702
        Aff_F27C8.5 14923 14231
        Aff_F27C8.6 12380 11628
      Feature_object (167)
      Feature_data: F27C8:Polysome 1 33837
        F27C8:TranscriptionallyActiveRegion 1 33837
        F27C8:ChIPSeqTF 1 33837
        F27C8:TRF 1 33837
        F27C8:Dust 1 33837
        F27C8:inverted 1 33837
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: W09C2 33731
    Overlap_left: T05A1
    Clone_left_end: F27C8 1
      W09C2 33731
    Clone_right_end: T05A1 2250
  DB_info: Database: EMBL NDB_AC Z68216
        NDB_SV Z68216.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Lloyd CR
    From_laboratory: HX
    Date_directory: 951121
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F27C8
  Properties: Genomic_canonical
    Checksum: MD5: 6c35628410c179c2589481fa2c5b4520
    Status: Finished: 21 Nov 1995 00:00:00
      Submitted: 13 Dec 1995 00:00:00
      Annotated: 11 Dec 1995 00:00:00
  Map: Sequence-IV Ends: Left: 4828
        Right: 4843
  Interpolated_map_position: IV 4.32527
  Assembly_tags: Finished Left 1 4 F27C8
    Clone left end 1 4 BEGINNING OF F27C8
      33731 33734 BEGINNING OF W09C2
    Clone right end 2247 2250 END T05A1
    Finished Right 33834 33837
  Method: Genomic_canonical