WormBase Tree Display for CDS: F26F12.3a
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| F26F12.3a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F26F12 | |||
| Structure | Source_exons | 1 | 38 | |||
| 1444 | 1778 | |||||
| 2946 | 5029 | |||||
| 5081 | 5214 | |||||
| 5763 | 5844 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | H2KYE2 | ||
| UniProt | UniProtAcc | H2KYE2 | ||||
| UniProt_GCRP | UniProtAcc | H2KYE2 | ||||
| AlphaFold | entry | H2KYE2 | ||||
| NCBI_protein | GI_number | GI:351020689 | ||||
| TREEFAM | TREEFAM_ID | TF317685 | ||||
| Protein_id | CHROMOSOME_V | CCD62677 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01485 (IBR domain, a half RING-finger domain); contains similarity to Interpro domain IPR002867 (IBR domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | BJ107473 | |||
| Visible | Gene | WBGene00017834 | ||||
| Corresponding_transcript | F26F12.3a.1 | |||||
| Corresponding_protein | CE36538 | |||||
| Corresponding_PCR_product | cenix:39-a4 | |||||
| mv_F26F12.3 | ||||||
| mv_F26F12.3b | ||||||
| sjj_F26F12.3 | ||||||
| sjj_f26f12.3a | ||||||
| Corresponding_oligo_set (22) | ||||||
| Matching_cDNA (62) | ||||||
| RNAi_result | WBRNAi00031454 | |||||
| WBRNAi00000748 | ||||||
| WBRNAi00045651 | ||||||
| WBRNAi00013953 | ||||||
| WBRNAi00013952 | ||||||
| Microarray_results (30) | ||||||
| Brief_identification | IBR domain-containing protein | Accession_evidence | UniProt | TR:H2KYE2 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 26 Oct 2004 00:00:00 | WBPerson1849 | ||||
| Associated_feature | WBsf002788 | |||||
| Method | curated |
