WormBase Tree Display for CDS: F25H2.13
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| F25H2.13 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | |||
| Structure | Source_exons (14) | |||||
| DB_info | Database | KEGG | KEGG_id | 3.6.4.12 | ||
| SwissProt | UniProtAcc | Q93575 | ||||
| UniProt | UniProtAcc | Q93575 | ||||
| UniProt_GCRP | UniProtAcc | Q93575 | ||||
| AlphaFold | entry | Q93575 | ||||
| NCBI_protein | GI_number | GI:3876338 | ||||
| TREEFAM | TREEFAM_ID | TF317291 | ||||
| Protein_id | CHROMOSOME_I | CAB02102 | 1 | |||
| DB_remark | RTEL-1 protein; contains similarity to Pfam domains PF06733 (DEAD_2), PF13307 (Helicase C-terminal domain); contains similarity to Interpro domains IPR010614 (RAD3-like helicase, DEAD), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR045028 (Helicase superfamily 1/2, DinG/Rad3-like), IPR006554 (Helicase-like, DEXD box c2 type), IPR006555 (ATP-dependent helicase, C-terminal), IPR013020 (ATP-dependent helicase Rad3/Chl1-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009124 | ||||
| Corresponding_transcript | F25H2.13.1 | |||||
| F25H2.13.2 | ||||||
| Corresponding_protein | CE15894 | |||||
| Corresponding_PCR_product | cenix:147-a7 | |||||
| mv_F25H2.13 | ||||||
| sjj_F25H2.13 | ||||||
| Corresponding_oligo_set (19) | ||||||
| Matching_cDNA (51) | ||||||
| RNAi_result | WBRNAi00045537 | |||||
| WBRNAi00031390 | ||||||
| WBRNAi00062217 | ||||||
| WBRNAi00116928 | ||||||
| WBRNAi00003456 | ||||||
| WBRNAi00075593 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | Regulator of telomere elongation helicase 1 homolog | Accession_evidence | UniProt | SP:Q93575 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf014797 | |||||
| Method | curated |
