WormBase Tree Display for CDS: F21A3.11
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F21A3.11 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F21A3 | |||
Structure | Source_exons | 1 | 367 | |||
484 | 666 | |||||
718 | 904 | |||||
1076 | 1190 | |||||
1301 | 1408 | |||||
1455 | 1652 | |||||
1828 | 1965 | |||||
2156 | 2350 | |||||
DB_info | Database | KEGG | KEGG_id | 3.1.3.2 | ||
TrEMBL | UniProtAcc | H2FLJ4 | ||||
UniProt | UniProtAcc | H2FLJ4 | ||||
UniProt_GCRP | UniProtAcc | H2FLJ4 | ||||
AlphaFold | entry | H2FLJ4 | ||||
NCBI_protein | GI_number | GI:371571136 | ||||
TREEFAM | TREEFAM_ID | TF313052 | ||||
Protein_id | CHROMOSOME_V | CCF23326 | 1 | |||
DB_remark | contains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF14008 (Iron/zinc purple acid phosphatase-like protein C), PF16656 (Purple acid Phosphatase, N-terminal domain); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR008963 (Purple acid phosphatase-like, N-terminal), IPR015914 (Purple acid phosphatase, N-terminal), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR025733 (Iron/zinc purple acid phosphatase-like C-terminal domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00219316 | ||||
Corresponding_transcript | F21A3.11.1 | |||||
Corresponding_protein | CE47027 | |||||
Corresponding_PCR_product | cenix:51-g6 | |||||
mv_F21A3.2 | ||||||
sjj_F21A3.2 | ||||||
smd_F21A3.2:2 | ||||||
Corresponding_oligo_set (21) | ||||||
Matching_cDNA (43) | ||||||
RNAi_result | WBRNAi00045161 | |||||
WBRNAi00031197 | ||||||
WBRNAi00013653 | ||||||
WBRNAi00103297 | ||||||
Microarray_results (23) | ||||||
Brief_identification | Purple acid phosphatase | Accession_evidence | UniProt | TR:H2FLJ4 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |