WormBase Tree Display for CDS: F20B6.2
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| F20B6.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F20B6 | |||
| Structure | Source_exons | 1 | 237 | |||
| 287 | 556 | |||||
| 608 | 1436 | |||||
| 1484 | 1623 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q19626 | ||
| UniProt | UniProtAcc | Q19626 | ||||
| UniProt_GCRP | UniProtAcc | Q19626 | ||||
| AlphaFold | entry | Q19626 | ||||
| NCBI_protein | GI_number | GI:351061878 | ||||
| TREEFAM | TREEFAM_ID | TF300313 | ||||
| Protein_id | CHROMOSOME_X | CCD69755 | 1 | |||
| DB_remark | VHA-12 protein; contains similarity to Pfam domains PF00006 (ATP synthase alpha/beta family, nucleotide-binding domain), PF02874 (ATP synthase alpha/beta family, beta-barrel domain); contains similarity to Interpro domains IPR022879 (V-type ATP synthase regulatory subunit B/beta), IPR000194 (ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005723 (ATPase, V1 complex, subunit B), IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006921 | ||||
| Corresponding_transcript | F20B6.2.1 | |||||
| Corresponding_protein | CE04424 | |||||
| Corresponding_PCR_product | WBPaper00026649:F20B6_1.1 | |||||
| cenix:60-f2 | ||||||
| mv_F20B6.2 | ||||||
| sjj_F20B6.2 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (262) | ||||||
| RNAi_result (32) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | V-type proton ATPase subunit B 1 | Accession_evidence | UniProt | SP:Q19626 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf000965 | |||||
| Method | curated |
