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WormBase Tree Display for CDS: F17C11.10

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Name Class

F17C11.10EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF17C11
StructureSource_exons184
131642
693926
9751086
11321315
13601673
17183411
34763647
DB_infoDatabaseTrEMBLUniProtAccQ19520
UniProtUniProtAccQ19520
UniProt_GCRPUniProtAccQ19520
AlphaFoldentryQ19520
NCBI_proteinGI_numberGI:3876062
TREEFAMTREEFAM_IDTF105988
Protein_idCHROMOSOME_VCAA966321
DB_remarkCTF-4 protein; contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat), PF12341 (Minichromosome loss protein, Mcl1, middle region); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR022100 (Minichromosome loss protein Mcl1, middle region), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00008921
Corresponding_transcriptF17C11.10.1
Corresponding_proteinCE05657
Corresponding_PCR_productcenix:11-e11
mv_F17C11.10
sjj_F17C11.10
Corresponding_oligo_set (19)
Matching_cDNA (63)
RNAi_resultWBRNAi00013456
WBRNAi00108113
WBRNAi00007584
WBRNAi00094296
WBRNAi00108114
WBRNAi00044871
WBRNAi00108126
WBRNAi00094214
WBRNAi00108115
Microarray_results (20)
Brief_identificationMinichromosome loss protein Mcl1 middle region domain-containing proteinAccession_evidenceUniProtTR:Q19520
RNASeq_FPKM (74)
Associated_featureWBsf027769
Methodcurated