WormBase Tree Display for CDS: F11D11.3
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F11D11.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F11D11 | |||
Structure | Source_exons | 1 | 206 | |||
295 | 440 | |||||
754 | 1074 | |||||
1124 | 1269 | |||||
1864 | 2053 | |||||
2113 | 2288 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O62153 | ||
UniProt | UniProtAcc | O62153 | ||||
UniProt_GCRP | UniProtAcc | O62153 | ||||
AlphaFold | entry | O62153 | ||||
NCBI_protein | GI_number | GI:3875785 | ||||
TREEFAM | TREEFAM_ID | TF315857 | ||||
Protein_id | CHROMOSOME_V | CAB04096 | 1 | |||
DB_remark | contains similarity to Pfam domain PF03409 (Transmembrane glycoprotein); contains similarity to Interpro domain IPR005071 (Transmembrane glycoprotein) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008698 | ||||
Corresponding_transcript | F11D11.3.1 | |||||
Corresponding_protein | CE15794 | |||||
Corresponding_PCR_product | cenix:127-d7 | |||||
sjj_F11D11.3 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA | male_Nanopore_Roach_102585 | Inferred_automatically | transcript_builder.pl | |||
male_Nanopore_Roach_150053 | Inferred_automatically | transcript_builder.pl | ||||
male_Nanopore_Roach_171554 | ||||||
adult_Nanopore_Roach_20068 | Inferred_automatically | transcript_builder.pl | ||||
male_Nanopore_Roach_44795 | Inferred_automatically | transcript_builder.pl | ||||
OSTF30043B11 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00044378 | |||||
WBRNAi00013126 | ||||||
Microarray_results (19) | ||||||
Brief_identification | CUB_2 domain-containing protein | Accession_evidence | UniProt | TR:O62153 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |