WormBase Tree Display for CDS: F02D10.1
expand all nodes | collapse all nodes | view schema
| F02D10.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F02D10 | |||
| Structure | Source_exons | 1 | 168 | |||
| 218 | 1000 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q19111 | ||
| UniProt | UniProtAcc | Q19111 | ||||
| UniProt_GCRP | UniProtAcc | Q19111 | ||||
| AlphaFold | entry | Q19111 | ||||
| NCBI_protein | GI_number | GI:3875538 | ||||
| Protein_id | CHROMOSOME_X | CAA91932 | 1 | |||
| DB_remark | COL-183 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000756 | ||||
| Corresponding_transcript | F02D10.1.1 | |||||
| Corresponding_protein | CE03136 | |||||
| Corresponding_PCR_product | cenix:183-d2 | |||||
| mv_F02D10.1 | ||||||
| sjj_F02D10.1 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA | male_Nanopore_Roach_121680 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_5783 | ||||||
| male_Nanopore_Roach_8391 | ||||||
| male_Nanopore_Roach_10252 | ||||||
| L3_Nanopore_Roach_74659 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_51604 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_8853 | ||||||
| male_Nanopore_Roach_8247 | ||||||
| male_Nanopore_Roach_10353 | ||||||
| L1_Nanopore_Li_275497 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00061090 | |||||
| WBRNAi00061088 | ||||||
| WBRNAi00061087 | ||||||
| WBRNAi00027257 | ||||||
| WBRNAi00025005 | ||||||
| WBRNAi00012771 | ||||||
| WBRNAi00061089 | ||||||
| WBRNAi00043802 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q19111 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
