WormBase Tree Display for CDS: E04D5.1b
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| E04D5.1b | SMap | S_parent | Sequence | E04D5 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 25 | |||
| 82 | 154 | |||||
| 207 | 284 | |||||
| 339 | 471 | |||||
| 532 | 705 | |||||
| 778 | 828 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q19052 | ||
| UniProtIsoformAcc | Q19052-2 | |||||
| UniProt | UniProtAcc | Q19052 | ||||
| UniProt_GCRP | UniProtAcc | Q19052 | ||||
| AlphaFold | entry | Q19052 | ||||
| NCBI_protein | GI_number | GI:58081738 | ||||
| Protein_id | CHROMOSOME_II | CAC42280 | 2 | |||
| DB_remark | EIF-2A protein; contains similarity to Interpro domain IPR011387 (Translation initiation factor 2A) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | AV196661 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00008480 | ||||
| Corresponding_transcript | E04D5.1b.1 | |||||
| Corresponding_protein | CE37821 | |||||
| Corresponding_PCR_product | cenix:200-a4 | |||||
| mv_E04D5.1 | ||||||
| sjj_E04D5.1 | ||||||
| Corresponding_oligo_set | A_12_P107819 | |||||
| GPL3518_CE27904 | ||||||
| GPL8673_E04D5_1bP00035 | ||||||
| GPL8673_E04D5_1bP00113 | ||||||
| GPL8673_E04D5_1bP00326 | ||||||
| GPL9450_E04D5.1b | ||||||
| cea2.d.18415 | ||||||
| Matching_cDNA | male_Nanopore_Roach_104869 | |||||
| young_adult_Nanopore_Roach_13865 | ||||||
| young_adult_Nanopore_Roach_89478 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_8199 | ||||||
| L2_Nanopore_Roach_67576 | ||||||
| adult_Nanopore_Roach_100343 | ||||||
| adult_Nanopore_Roach_72472 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_310382 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_230274 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00043669 | |||||
| WBRNAi00012683 | ||||||
| WBRNAi00007759 | ||||||
| Microarray_results | SMD_E04D5.1 | |||||
| A_12_P107819 | ||||||
| GPL3518_CE27904 | ||||||
| GPL8673_E04D5_1bP00035 | ||||||
| GPL8673_E04D5_1bP00113 | ||||||
| GPL8673_E04D5_1bP00326 | ||||||
| GPL9450_E04D5.1b | ||||||
| cea2.d.18415 | ||||||
| Brief_identification | Eukaryotic translation initiation factor 2A | Accession_evidence | UniProt | SP:Q19052 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 23 Nov 2004 00:00:00 | WBPerson1846 | ||||
| Remark | [041123 dl] Modified prediction in line with TSL acceptor site | Curator_confirmed | WBPerson1846 | |||
| Method | curated |
