WormBase Tree Display for CDS: DH11.5d
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| DH11.5d | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_II | |||
| Structure | Source_exons (17) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EDP5 | ||
| UniProt | UniProtAcc | G5EDP5 | ||||
| UniProt_GCRP | UniProtAcc | G5EDP5 | ||||
| AlphaFold | entry | G5EDP5 | ||||
| NCBI_protein | GI_number | GI:345109036 | ||||
| TREEFAM | TREEFAM_ID | TF344264 | ||||
| Protein_id | CHROMOSOME_II | CCD31050 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00168 (C2 domain); contains similarity to Interpro domains IPR035892 (C2 domain superfamily), IPR000008 (C2 domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
| Visible | Gene | WBGene00008438 | ||||
| Corresponding_transcript | DH11.5d.1 | |||||
| Corresponding_protein | CE46440 | |||||
| Corresponding_PCR_product | cenix:107-d7 | |||||
| cenix:68-g11 | ||||||
| mv_DH11.4 | ||||||
| mv_DH11.5 | ||||||
| sjj_DH11.4 | ||||||
| sjj_DH11.5 | ||||||
| Corresponding_oligo_set (34) | ||||||
| Matching_cDNA (32) | ||||||
| RNAi_result | WBRNAi00030440 | |||||
| WBRNAi00030441 | ||||||
| WBRNAi00043546 | ||||||
| WBRNAi00012622 | ||||||
| WBRNAi00043547 | ||||||
| WBRNAi00012621 | ||||||
| WBRNAi00092877 | ||||||
| Microarray_results (37) | ||||||
| Brief_identification | C2 domain-containing protein | Accession_evidence | UniProt | TR:G5EDP5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 28 Jul 2011 00:00:00 | WBPerson1983 | ||||
| Remark | [11028 pad] Created this alternate isoform based on RNASeq splice data. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Method | curated |
