WormBase Tree Display for CDS: D2030.6
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| D2030.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D2030 | |||
| Structure | Source_exons | 1 | 354 | |||
| 404 | 718 | |||||
| 767 | 1009 | |||||
| 1054 | 1495 | |||||
| 1542 | 1906 | |||||
| 1954 | 2128 | |||||
| 2177 | 2414 | |||||
| 2461 | 2647 | |||||
| 2693 | 2848 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P90786 | ||
| UniProt | UniProtAcc | P90786 | ||||
| UniProt_GCRP | UniProtAcc | P90786 | ||||
| AlphaFold | entry | P90786 | ||||
| NCBI_protein | GI_number | GI:3875393 | ||||
| TREEFAM | TREEFAM_ID | TF350431 | ||||
| Protein_id | CHROMOSOME_I | CAA98113 | 1 | |||
| DB_remark | PRG-1 protein; contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR003165 (Piwi domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00004178 | ||||
| Corresponding_transcript | D2030.6.1 | |||||
| Corresponding_protein | CE09083 | |||||
| Corresponding_PCR_product | cenix:246-d5 | |||||
| mv_D2030.6 | ||||||
| sjj2_D2030.6 | ||||||
| sjj_D2030.6 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (103) | ||||||
| RNAi_result | WBRNAi00007898 | |||||
| WBRNAi00091976 | ||||||
| WBRNAi00116862 | ||||||
| WBRNAi00091977 | ||||||
| WBRNAi00003287 | ||||||
| WBRNAi00043476 | ||||||
| WBRNAi00115384 | ||||||
| WBRNAi00030403 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Piwi-like protein 1 | Accession_evidence | UniProt | TR:P90786 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf015591 | |||||
| Method | curated |
