WormBase Tree Display for CDS: D1081.2
expand all nodes | collapse all nodes | view schema
| D1081.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D1081 | |||
| Structure | Source_exons | 1 | 225 | |||
| 770 | 1057 | |||||
| 1973 | 2300 | |||||
| 2426 | 2568 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q18955 | ||
| UniProt | UniProtAcc | Q18955 | ||||
| UniProt_GCRP | UniProtAcc | Q18955 | ||||
| AlphaFold | entry | Q18955 | ||||
| NCBI_protein | GI_number | GI:3875320 | ||||
| TREEFAM | TREEFAM_ID | TF318482 | ||||
| Protein_id | CHROMOSOME_I | CAB00023 | 1 | |||
| DB_remark | UNC-120 protein; contains similarity to Pfam domain PF00319 (SRF-type transcription factor (DNA-binding and dimerisation domain)); contains similarity to Interpro domains IPR002100 (Transcription factor, MADS-box), IPR036879 (Transcription factor, MADS-box superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006844 | ||||
| Corresponding_transcript | D1081.2.1 | |||||
| Corresponding_protein | CE05534 | |||||
| Corresponding_PCR_product | cenix:159-h6 | |||||
| mv_D1081.2 | ||||||
| sjj_D1081.2 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | male_Nanopore_Roach_100888 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_78932 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_42313 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_63514 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_62616 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_39848 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_34217 | ||||||
| L1_Nanopore_Roach_61834 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_45716 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_12721 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_58814 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_40242 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_15893 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_87066 | Inferred_automatically | transcript_builder.pl | ||||
| RST5_372475 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_66585 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_11374 | Inferred_automatically | transcript_builder.pl | ||||
| yk662h4.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_63115 | Inferred_automatically | transcript_builder.pl | ||||
| RST3_377662 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR002C7_1 | Inferred_automatically | transcript_builder.pl | ||||
| CK581073 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6315|c0_g1_i3 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6315|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_100730 | Inferred_automatically | transcript_builder.pl | ||||
| EC019423 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_54936 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_47730 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_114094 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_72851 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6315|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
| yk636h12.5 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result (63) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Serum response factor homolog | Accession_evidence | UniProt | SP:Q18955 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf020057 | |||||
| Method | curated |
