WormBase Tree Display for CDS: CRE23918

CRE23918 SMap: S_parent: Sequence: Crem_Contig36
  Structure: Source_exons: 1 170
      353 446
      504 911
      965 1068
      1114 1324
      1374 1448
      1496 1879
      1925 2165
      2219 2472
      2518 2641
      2693 3692
      4335 4436
      4635 4890
      5194 5441
      5515 5619
      5675 6065
      6113 6634
      10155 10241
      10383 10485
      14247 14325
      20750 20858
      20959 21765
      21950 22207
      22252 22499
      22601 22781
      23567 23638
      23813 23940
      23989 24194
      24236 24297
      24343 24475
      24531 24635
      24684 24868
  DB_info: DB_remark: CRE-UNC-73 protein; contains similarity to Pfam domains PF00621 (RhoGEF domain), PF07679 (Immunoglobulin I-set domain); contains similarity to Interpro domains IPR001251 (CRAL-TRIO lipid binding domain), IPR036028 (SH3-like domain superfamily), IPR003599 (Immunoglobulin subtype), IPR003961 (Fibronectin type III), IPR000219 (Dbl homology (DH) domain), IPR013098 (Immunoglobulin I-set), IPR035899 (Dbl homology (DH) domain superfamily), IPR001849 (Pleckstrin homology domain), IPR001452 (SH3 domain), IPR013783 (Immunoglobulin-like fold), IPR011993 (PH-like domain superfamily), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily)
  Origin: From_laboratory: RW
    Species: Caenorhabditis remanei
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00062359
    Corresponding_transcript: CRE23918.1
    Corresponding_protein: RP43889
    Corresponding_oligo_set: GPL14146_CRE23918_1985-2044_0.737_336_C
      GPL14146_CRE23918_5707-5766_0.818_56_B
      GPL14146_CRE23918_6105-6164_0.789_116_A
    Microarray_results: GPL14146_CRE23918_1985-2044_0.737_336_C
      GPL14146_CRE23918_5707-5766_0.818_56_B
      GPL14146_CRE23918_6105-6164_0.789_116_A
    RNASeq_FPKM: WBls:0000004 25.3867 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        25.4573 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (54)
      WBls:0000027 19.2575 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        20.4871 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        22.4692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.39027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 11.6495 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        12.0279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        2.29515 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 21.7324 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        22.2973 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        25.0551 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        7.80477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.30733 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        9.12751 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 10.5994 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        10.6293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        10.7293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        11.44 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        6.5508 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        7.26009 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        7.67564 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        8.14319 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        8.39371 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        9.8373 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
  Method: curated