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WormBase Tree Display for Pseudogene: CJA48033

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Name Class

CJA48033EvidenceInferred_automaticallymake_isoforms.pl
From_analysistRNAscan-SE-1.3.1
SMapS_parentSequenceCjap.Contig18192
StructureSource_exons173
DB_infoDB_remarkncRNA pseudogene
DatabaseRfamRfam_accRF00005
OriginFrom_laboratoryHX
SpeciesCaenorhabditis japonica
TypeRNA_pseudogene
VisibleGeneWBGene00251897
Brief_identificationtRNA-Pseudo
RNASeq_FPKMWBls:00000040From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
32.5446From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
47.4362From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
RemarktRNAscan-SE-1.3.1 model (cove score 30.63)
MethodtRNA_pseudogene