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WormBase Tree Display for CDS: CJA19114

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Name Class

CJA19114EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig54
StructureSource_exons (12)
DB_infoDatabaseTREEFAMTREEFAM_IDTF316199
DB_remarkCJP-UNC-96 protein
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00138318
Corresponding_transcriptCJA19114.1
Corresponding_proteinJA62310
Corresponding_oligo_setGPL14145_CJA19114_827-886_0.920_4_C
GPL14145_CJA19114_918-977_0.947_1_B
GPL14145_CJA19114_1023-1082_0.902_7_A
Matching_cDNAFF113143Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA19114_1023-1082_0.902_7_A
GPL14145_CJA19114_827-886_0.920_4_C
GPL14145_CJA19114_918-977_0.947_1_B
RNASeq_FPKMWBls:000000465.026From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002788.0628From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003839.6855From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
44.2039From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004111.4699From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
12.5041From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
14.9654From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
15.721From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
17.3057From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
18.0196From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
8.18499From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
9.51557From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
Remarkbased on Augustus prediction Cjap.Contig54.g69.t1[100726 mh6]
Methodcurated