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WormBase Tree Display for CDS: CJA16339

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Name Class

CJA16339EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17204
StructureSource_exons112
15312268
23152463
26832953
38924086
DB_infoDatabaseTREEFAMTREEFAM_IDTF102012
DB_remarkCJP-UNC-23 protein; contains similarity to Interpro domains IPR003103 (BAG domain), IPR037689 (BAG family molecular chaperone regulator 2)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00135543
Corresponding_transcriptCJA16339.1
Corresponding_proteinJA05439
Corresponding_oligo_setGPL14145_CJA16339_892-951_0.882_43_C
GPL14145_CJA16339_1340-1399_0.942_6_B
GPL14145_CJA16339_1403-1462_0.835_81_A
Matching_cDNAFF122996Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA16339_1340-1399_0.942_6_B
GPL14145_CJA16339_1403-1462_0.835_81_A
GPL14145_CJA16339_892-951_0.882_43_C
RNASeq_FPKMWBls:000000477.8041From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:0000027127.208From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003859.113From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
66.9318From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004127.0112From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
28.318From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
30.0248From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
30.5737From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
32.3776From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
36.3825From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
37.9799From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
39.1109From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
Remarkbased on Augustus prediction Cjap.Contig17204.g14732.t1[100726 mh6]
Methodcurated