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WormBase Tree Display for CDS: CJA15788a

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Name Class

CJA15788aSMapS_parentSequenceCjap.Contig17186
StructureSource_exons1187
18421987
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
Isoform
VisibleGeneWBGene00134992
Corresponding_transcriptCJA15788a.1
CJA15788a.2
CJA15788a.3
Corresponding_proteinJA64427
Corresponding_oligo_setGPL14145_CJA15788_483-542_0.964_1_A
Matching_cDNAFD513169Inferred_automaticallytranscript_builder.pl
japonica_GG7619|c5_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG7619|c5_g1_i2Inferred_automaticallytranscript_builder.pl
japonica_GG7619|c5_g1_i3Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA15788_483-542_0.964_1_A
RNASeq_FPKMWBls:000000482.8093From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002785.7469From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003847.592From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
58.3992From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004121.3572From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
30.0645From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
30.7037From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
36.902From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
48.5195From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
59.145From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
59.5286From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
77.1857From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
Remarkbased on Augustus prediction Cjap.Contig17186.g14596.t1[100726 mh6]
Methodcurated