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WormBase Tree Display for CDS: CJA15182a

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Name Class

CJA15182aSMapS_parentSequenceCjap.Contig18158
StructureSource_exons (13)
DB_infoDB_remarkCJP-UNC-93 protein; contains similarity to Interpro domain IPR036259 (MFS transporter superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
Isoform
VisibleGeneWBGene00134386
Corresponding_transcriptCJA15182a.1
Corresponding_proteinJA07088
Corresponding_oligo_setGPL14145_CJA15182_929-988_0.871_13_C
GPL14145_CJA15182_1060-1119_0.832_21_B
GPL14145_CJA15182_1390-1449_0.849_15_A
Matching_cDNAjaponica_GG11867|c0_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA15182_1060-1119_0.832_21_B
GPL14145_CJA15182_1390-1449_0.849_15_A
GPL14145_CJA15182_929-988_0.871_13_C
RNASeq_FPKMWBls:00000045.82047From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.58643From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000383.39489From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
3.67973From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.179902From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.697709From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.806483From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.850594From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.966858From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
1.08573From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.1665From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.44578From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig18158.g26273.t2[100726 mh6]
Methodcurated