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WormBase Tree Display for CDS: CJA13310a

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Name Class

CJA13310aSMapS_parentSequenceCjap.Contig18194
StructureSource_exons (14)
DB_infoDB_remarkCJP-RGS-7 protein; contains similarity to Pfam domains PF00168 (C2 domain), PF00615 (Regulator of G protein signaling domain); contains similarity to Interpro domains IPR036305 (RGS domain superfamily), IPR016137 (RGS domain), IPR035892 (C2 domain superfamily), IPR000008 (C2 domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00132514
Corresponding_transcriptCJA13310a.1
Corresponding_proteinJA41904
Corresponding_oligo_setGPL14145_CJA13310_1989-2048_0.932_10_C
GPL14145_CJA13310_2072-2131_0.788_94_A
GPL14145_CJA13310_2274-2333_0.946_3_B
GPL14145_CJA13390_129-188_0.525_15_A
Microarray_resultsGPL14145_CJA13310_1989-2048_0.932_10_C
GPL14145_CJA13310_2072-2131_0.788_94_A
GPL14145_CJA13310_2274-2333_0.946_3_B
GPL14145_CJA13390_129-188_0.525_15_A
RNASeq_FPKMWBls:000000439.6125From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.48908From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.65991From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
1.76323From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.928496From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.02934From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
12.2625From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.23742From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
18.3488From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
21.595From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
22.8909From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.65354From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig18194.g27652.t1[100726 mh6]
Methodcurated