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WormBase Tree Display for CDS: CJA09292

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Name Class

CJA09292EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17796
StructureSource_exons152
152403
15321628
18411979
DB_infoDatabaseTREEFAMTREEFAM_IDTF316909
DB_remarkCJP-CPG-20 protein
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00128494
Corresponding_transcriptCJA09292.1
Corresponding_proteinJA10541
Corresponding_oligo_setGPL14145_CJA09292_77-136_0.911_11_C
GPL14145_CJA09292_150-209_0.682_55_B
GPL14145_CJA09292_477-536_0.927_7_A
Matching_cDNAjaponica_GG658|c7_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA09292_150-209_0.682_55_B
GPL14145_CJA09292_477-536_0.927_7_A
GPL14145_CJA09292_77-136_0.911_11_C
RNASeq_FPKMWBls:0000004207.438From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.621895From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.901884From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.692422From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
10.9262From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
1.17924From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
13.7306From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.05598From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.25007From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
9.99624From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig17796.g20210.t1[100726 mh6]
Methodcurated