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WormBase Tree Display for CDS: CBN30789

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Name Class

CBN30789SMapS_parentSequenceCbre_Contig1331
StructureSource_exons (12)
DB_infoDB_remarkCBN-UNC-104 protein; contains similarity to Pfam domains PF00225 (Kinesin motor domain), PF00498 (FHA domain), PF16183 (Kinesin-associated); contains similarity to Interpro domains IPR008984 (SMAD/FHA domain superfamily), IPR032405 (Kinesin-associated), IPR001752 (Kinesin motor domain), IPR036961 (Kinesin motor domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR000253 (Forkhead-associated (FHA) domain), IPR027640 (Kinesin-like protein)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00192754
Corresponding_transcriptCBN30789.1
Corresponding_proteinCN33435
Corresponding_oligo_setGPL14142_CBN30789_2162-2221_0.952_1_A
GPL14142_CBN30789_2194-2253_0.948_2_B
GPL14142_CBN30789_2197-2256_0.948_3_C
Microarray_resultsGPL14142_CBN30789_2162-2221_0.952_1_A
GPL14142_CBN30789_2194-2253_0.948_2_B
GPL14142_CBN30789_2197-2256_0.948_3_C
RNASeq_FPKMWBls:00000020.837613From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
1.83522From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.44999From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
3.00026From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
3.20509From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
4.25919From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.77029From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
4.88931From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
WBls:00000040.879389From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
11.6451From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
15.8226From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
17.113From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
19.465From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
21.3871From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000384.49725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
5.14125From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (12)
Remark[20090520 js] Original name Cbre_Contig1331.brenneri.jigsaw.1
Methodcurated