WormBase Tree Display for CDS: C50F4.5
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| C50F4.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C50F4 | |||
| Structure | Source_exons | 1 | 135 | |||
| 350 | 586 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q27484 | ||
| UniProt | UniProtAcc | Q27484 | ||||
| UniProt_GCRP | UniProtAcc | Q27484 | ||||
| AlphaFold | entry | Q27484 | ||||
| NCBI_protein | GI_number | GI:3875123 | ||||
| Protein_id | CHROMOSOME_V | CAA94740 | 1 | |||
| DB_remark | HIS-41 protein; contains similarity to Pfam domain PF00125 (Core histone H2A/H2B/H3/H4); contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone H2A/H2B/H3) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00001915 | ||||
| Corresponding_transcript | C50F4.5.1 | |||||
| Corresponding_protein | CE05470 | |||||
| Corresponding_PCR_product | cenix:49-d11 | |||||
| mv_C50F4.5 | ||||||
| sjj_C50F4.5 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | male_Nanopore_Roach_119967 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_1583 | ||||||
| young_adult_Nanopore_Roach_98599 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_121799 | ||||||
| L4_Nanopore_Roach_822 | ||||||
| L2_Nanopore_Roach_77570 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_63114 | ||||||
| L4_Nanopore_Roach_50653 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_1069 | ||||||
| L3_Nanopore_Roach_1125 | ||||||
| L1_Nanopore_Roach_77916 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_73338 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_45006 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_2026 | ||||||
| L2_Nanopore_Roach_96027 | ||||||
| L2_Nanopore_Roach_4933 | ||||||
| adult_Nanopore_Roach_80866 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_2273 | ||||||
| adult_Nanopore_Roach_1397 | ||||||
| yk1013d01.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk1502g03.3 | Inferred_automatically | transcript_builder.pl | ||||
| EC033810 | Inferred_automatically | transcript_builder.pl | ||||
| CN800164 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR157H4_1 | Inferred_automatically | transcript_builder.pl | ||||
| yk1013d01.3 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_263427 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_69743 | Inferred_automatically | transcript_builder.pl | ||||
| EC003716 | Inferred_automatically | transcript_builder.pl | ||||
| yk1755h03.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1306h01.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_230020 | Inferred_automatically | transcript_builder.pl | ||||
| CN798654 | Inferred_automatically | transcript_builder.pl | ||||
| EC007626 | Inferred_automatically | transcript_builder.pl | ||||
| EC023440 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_273376 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_314398 | Inferred_automatically | transcript_builder.pl | ||||
| EC019877 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_299470 | Inferred_automatically | transcript_builder.pl | ||||
| EC004223 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_57545 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG5689|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EC039170 | Inferred_automatically | transcript_builder.pl | ||||
| CK584883 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result (11) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Probable histone H2B 3 | Accession_evidence | UniProt | SP:Q27484 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
