WormBase Tree Display for Sequence: C45G9
expand all nodes | collapse all nodes | view schema
| C45G9 | DNA | C45G9 | 40295 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (15) | ||||
| CDS_child (302) | ||||||
| Transcript (20) | ||||||
| Nongenomic | yk248f11 | 988 | 4609 | |||
| yk345b6 | 12414 | 14346 | ||||
| PCR_product (58) | ||||||
| Allele (485) | ||||||
| Oligo_set | Aff_C45G9.1 | 39499 | 40232 | |||
| Aff_C45G9.10 | 21888 | 21146 | ||||
| Aff_C45G9.11 | 29283 | 28258 | ||||
| Aff_C45G9.12 | 35861 | 34695 | ||||
| Aff_C45G9.2 | 33825 | 34573 | ||||
| Aff_C45G9.4 | 27354 | 28084 | ||||
| Aff_C45G9.5 | 12883 | 14157 | ||||
| Aff_C45G9.6 | 3334 | 4254 | ||||
| Aff_C45G9.7 | 11408 | 10554 | ||||
| Aff_C45G9.8 | 15135 | 14436 | ||||
| Feature_object | WBsf992275 | 1098 | 1172 | |||
| WBsf992276 | 4982 | 5132 | ||||
| WBsf992277 | 6562 | 6712 | ||||
| WBsf992278 | 7642 | 7693 | ||||
| WBsf992279 | 7772 | 7792 | ||||
| WBsf992280 | 11542 | 11692 | ||||
| WBsf992281 | 13303 | 13453 | ||||
| WBsf992282 | 15683 | 15833 | ||||
| WBsf992283 | 18203 | 18353 | ||||
| WBsf992284 | 30183 | 30274 | ||||
| WBsf992285 | 31163 | 31314 | ||||
| WBsf992286 | 34184 | 34222 | ||||
| WBsf1014833 | 13263 | 13413 | ||||
| WBsf008709 | 12382 | 12383 | ||||
| WBsf022064 | 35869 | 35868 | ||||
| WBsf023745 | 10436 | 10435 | ||||
| WBsf023815 | 8938 | 8939 | ||||
| WBsf025224 | 2116 | 2117 | ||||
| WBsf025372 | 8918 | 8923 | ||||
| WBsf025374 | 10455 | 10450 | ||||
| WBsf025460 | 2100 | 2105 | ||||
| WBsf039894 | 18909 | 20020 | ||||
| WBsf039895 | 26972 | 28084 | ||||
| WBsf039896 | 38964 | 40233 | ||||
| WBsf073318 | 8925 | 8925 | ||||
| WBsf073319 | 10437 | 10437 | ||||
| WBsf073320 | 14461 | 14461 | ||||
| WBsf073321 | 34575 | 34575 | ||||
| WBsf074174 | 10453 | 10453 | ||||
| WBsf074434 | 16926 | 16926 | ||||
| WBsf074970 | 12576 | 12576 | ||||
| WBsf074971 | 16962 | 16962 | ||||
| WBsf074972 | 28554 | 28554 | ||||
| WBsf075370 | 2109 | 2109 | ||||
| WBsf075371 | 10458 | 10458 | ||||
| WBsf075372 | 27366 | 27366 | ||||
| WBsf075782 | 10434 | 10434 | ||||
| WBsf075783 | 34697 | 34697 | ||||
| WBsf076547 | 14168 | 14168 | ||||
| WBsf077363 | 10433 | 10433 | ||||
| WBsf077364 | 14425 | 14425 | ||||
| WBsf078193 | 14466 | 14466 | ||||
| WBsf078965 | 14180 | 14180 | ||||
| WBsf079683 | 4676 | 4676 | ||||
| WBsf080197 | 2088 | 2088 | ||||
| WBsf080198 | 10457 | 10457 | ||||
| WBsf080199 | 14314 | 14314 | ||||
| WBsf126107 | 9276 | 9277 | ||||
| WBsf126108 | 17606 | 17605 | ||||
| WBsf126764 | 30390 | 30389 | ||||
| WBsf126953 | 11428 | 11427 | ||||
| WBsf161262 | 846 | 847 | ||||
| WBsf161263 | 6693 | 6694 | ||||
| WBsf161915 | 16926 | 16926 | ||||
| WBsf162628 | 10434 | 10434 | ||||
| WBsf162629 | 34697 | 34697 | ||||
| WBsf163189 | 2108 | 2108 | ||||
| WBsf163190 | 10437 | 10437 | ||||
| WBsf163578 | 10458 | 10458 | ||||
| WBsf163953 | 10457 | 10457 | ||||
| WBsf164339 | 16962 | 16962 | ||||
| WBsf164340 | 28554 | 28554 | ||||
| WBsf165032 | 2024 | 2024 | ||||
| WBsf165033 | 14172 | 14172 | ||||
| WBsf165034 | 35328 | 35328 | ||||
| WBsf166131 | 8935 | 8935 | ||||
| WBsf166132 | 10443 | 10443 | ||||
| WBsf166133 | 14431 | 14431 | ||||
| WBsf166134 | 16856 | 16856 | ||||
| WBsf166135 | 34603 | 34603 | ||||
| WBsf166922 | 10433 | 10433 | ||||
| WBsf167646 | 10459 | 10459 | ||||
| WBsf167647 | 34738 | 34738 | ||||
| WBsf168291 | 2814 | 2814 | ||||
| WBsf168292 | 16940 | 16940 | ||||
| WBsf168293 | 34701 | 34701 | ||||
| WBsf169656 | 2095 | 2095 | ||||
| WBsf169657 | 8713 | 8713 | ||||
| WBsf169658 | 10482 | 10482 | ||||
| WBsf169659 | 14156 | 14156 | ||||
| WBsf170169 | 10453 | 10453 | ||||
| WBsf170664 | 11428 | 11427 | ||||
| WBsf170725 | 12382 | 12383 | ||||
| WBsf170967 | 17606 | 17605 | ||||
| WBsf174596 | 2089 | 2090 | ||||
| WBsf174597 | 10437 | 10436 | ||||
| WBsf175361 | 8940 | 8941 | ||||
| WBsf175362 | 14422 | 14423 | ||||
| WBsf224849 | 612 | 842 | ||||
| WBsf224850 | 2025 | 2087 | ||||
| WBsf224851 | 8721 | 8935 | ||||
| WBsf224852 | 14159 | 14352 | ||||
| WBsf224853 | 14159 | 14412 | ||||
| WBsf224854 | 34576 | 34684 | ||||
| WBsf226630 | 10553 | 10460 | ||||
| WBsf226631 | 14436 | 14367 | ||||
| WBsf226632 | 18908 | 18873 | ||||
| WBsf226633 | 21146 | 21114 | ||||
| WBsf246074 | 4679 | 4680 | ||||
| WBsf246075 | 10361 | 10360 | ||||
| WBsf246076 | 10964 | 10963 | ||||
| WBsf246077 | 14418 | 14419 | ||||
| WBsf246078 | 14376 | 14377 | ||||
| WBsf246079 | 14196 | 14197 | ||||
| WBsf246080 | 18869 | 18868 | ||||
| WBsf246081 | 21113 | 21112 | ||||
| WBsf246082 | 28157 | 28158 | ||||
| WBsf246083 | 28239 | 28238 | ||||
| WBsf247715 | 34685 | 34686 | ||||
| WBsf247716 | 16734 | 16733 | ||||
| WBsf247717 | 34616 | 34615 | ||||
| WBsf248451 | 8948 | 8949 | ||||
| WBsf248644 | 9927 | 9928 | ||||
| WBsf248697 | 14364 | 14363 | ||||
| WBsf272597 | 2093 | 2094 | ||||
| WBsf273196 | 29591 | 29590 | ||||
| WBsf273236 | 2088 | 2089 | ||||
| WBsf273305 | 18867 | 18866 | ||||
| WBsf273318 | 14066 | 14067 | ||||
| WBsf273844 | 8936 | 8937 | ||||
| WBsf274171 | 12875 | 12874 | ||||
| WBsf615137 | 18856 | 18855 | ||||
| WBsf615807 | 34649 | 34648 | ||||
| WBsf615934 | 34668 | 34667 | ||||
| WBsf617404 | 8917 | 8918 | ||||
| WBsf617639 | 8868 | 8869 | ||||
| WBsf617670 | 2067 | 2068 | ||||
| WBsf617810 | 844 | 845 | ||||
| WBsf618481 | 28128 | 28129 | ||||
| WBsf618731 | 14106 | 14107 | ||||
| WBsf618930 | 34665 | 34666 | ||||
| WBsf619414 | 34649 | 34650 | ||||
| WBsf620571 | 34610 | 34611 | ||||
| WBsf898309 | 18026 | 18027 | ||||
| WBsf958312 | 855 | 856 | ||||
| WBsf958313 | 1634 | 1635 | ||||
| WBsf958314 | 3864 | 3865 | ||||
| WBsf958315 | 9276 | 9277 | ||||
| WBsf958316 | 10674 | 10673 | ||||
| WBsf958317 | 13551 | 13552 | ||||
| WBsf958319 | 17625 | 17624 | ||||
| WBsf958320 | 29365 | 29364 | ||||
| WBsf958321 | 29681 | 29680 | ||||
| WBsf958322 | 33011 | 33010 | ||||
| WBsf958323 | 35366 | 35365 | ||||
| WBsf958324 | 35801 | 35800 | ||||
| WBsf958325 | 35869 | 35868 | ||||
| WBsf980437 | 34684 | 34685 | ||||
| WBsf980531 | 14424 | 14425 | ||||
| WBsf035707 | 13807 | 13905 | ||||
| WBsf392582 | 33123 | 33436 | ||||
| WBsf393801 | 33302 | 33302 | ||||
| WBsf395583 | 11351 | 11884 | ||||
| WBsf395642 | 33108 | 33428 | ||||
| WBsf396537 | 418 | 681 | ||||
| WBsf396698 | 33047 | 33517 | ||||
| WBsf397550 | 11495 | 11783 | ||||
| WBsf399252 | 11470 | 11725 | ||||
| WBsf400017 | 11611 | 11749 | ||||
| WBsf400299 | 11576 | 11780 | ||||
| WBsf402131 | 33100 | 33427 | ||||
| WBsf403334 | 446 | 731 | ||||
| WBsf403982 | 38160 | 38359 | ||||
| WBsf404069 | 33126 | 33478 | ||||
| WBsf404759 | 11518 | 11833 | ||||
| WBsf404863 | 33178 | 33472 | ||||
| WBsf405640 | 11518 | 11833 | ||||
| WBsf405757 | 33178 | 33472 | ||||
| WBsf407781 | 33133 | 33430 | ||||
| WBsf407856 | 11468 | 11769 | ||||
| WBsf408400 | 11350 | 11907 | ||||
| WBsf409608 | 11351 | 11825 | ||||
| WBsf409723 | 33117 | 33429 | ||||
| WBsf410303 | 11424 | 11817 | ||||
| WBsf410428 | 33100 | 33431 | ||||
| WBsf413197 | 11482 | 11890 | ||||
| WBsf413236 | 33096 | 33466 | ||||
| WBsf413720 | 33180 | 33288 | ||||
| WBsf416019 | 33142 | 33410 | ||||
| WBsf416780 | 33138 | 33445 | ||||
| WBsf420673 | 34298 | 34532 | ||||
| WBsf421643 | 14436 | 14584 | ||||
| WBsf424030 | 11405 | 11888 | ||||
| WBsf424855 | 33137 | 33441 | ||||
| WBsf425122 | 33122 | 33432 | ||||
| WBsf425418 | 11494 | 11806 | ||||
| WBsf426103 | 37024 | 37063 | ||||
| WBsf426199 | 551 | 669 | ||||
| WBsf426519 | 38095 | 38119 | ||||
| WBsf427186 | 33001 | 33542 | ||||
| WBsf427575 | 11469 | 11883 | ||||
| WBsf428136 | 33003 | 33518 | ||||
| WBsf428605 | 11524 | 11870 | ||||
| WBsf429629 | 11523 | 11828 | ||||
| WBsf429690 | 33145 | 33441 | ||||
| WBsf430358 | 11439 | 11739 | ||||
| WBsf430455 | 33125 | 33345 | ||||
| WBsf430587 | 571 | 1450 | ||||
| WBsf431350 | 33120 | 33442 | ||||
| WBsf431723 | 11409 | 11822 | ||||
| WBsf432157 | 33156 | 33387 | ||||
| WBsf432600 | 592 | 1349 | ||||
| WBsf432606 | 33129 | 33455 | ||||
| WBsf432927 | 11405 | 11834 | ||||
| WBsf434734 | 32974 | 33485 | ||||
| WBsf435599 | 479 | 1490 | ||||
| WBsf436407 | 33085 | 33459 | ||||
| WBsf436935 | 12116 | 12340 | ||||
| WBsf437069 | 31204 | 31228 | ||||
| WBsf437711 | 33145 | 33436 | ||||
| WBsf438344 | 11622 | 11631 | ||||
| WBsf439572 | 18276 | 18303 | ||||
| WBsf440347 | 11333 | 12370 | ||||
| WBsf440903 | 33118 | 33428 | ||||
| WBsf441628 | 38042 | 38228 | ||||
| WBsf442631 | 33165 | 33401 | ||||
| WBsf443135 | 18534 | 18725 | ||||
| WBsf443173 | 11580 | 11779 | ||||
| WBsf046828 | 11121 | 11378 | ||||
| WBsf046829 | 11551 | 12582 | ||||
| WBsf046830 | 33053 | 33912 | ||||
| WBsf268245 | 31190 | 31190 | ||||
| WBsf268345 | 12833 | 12833 | ||||
| WBsf645141 | 702 | 740 | ||||
| WBsf645142 | 6684 | 6716 | ||||
| WBsf645143 | 9343 | 9355 | ||||
| WBsf645144 | 33286 | 33349 | ||||
| WBsf651030 | 11400 | 11400 | ||||
| WBsf651031 | 11573 | 11498 | ||||
| WBsf658881 | 2634 | 2634 | ||||
| WBsf658882 | 4041 | 4059 | ||||
| WBsf658883 | 33905 | 33933 | ||||
| WBsf658884 | 39803 | 39839 | ||||
| WBsf666863 | 11280 | 11262 | ||||
| WBsf666864 | 32559 | 32559 | ||||
| WBsf666865 | 32618 | 32602 | ||||
| WBsf679470 | 11592 | 11811 | ||||
| WBsf679471 | 38336 | 38355 | ||||
| WBsf701039 | 4483 | 4464 | ||||
| WBsf701040 | 6581 | 6581 | ||||
| WBsf701041 | 9264 | 9258 | ||||
| WBsf701042 | 11703 | 11639 | ||||
| WBsf701043 | 12479 | 12479 | ||||
| WBsf701044 | 33814 | 33788 | ||||
| WBsf261908 | 22550 | 22625 | ||||
| WBsf265356 | 3209 | 3315 | ||||
| WBsf265357 | 17728 | 17778 | ||||
| Feature_data | C45G9:Polysome | 1 | 40295 | |||
| C45G9:TranscriptionallyActiveRegion | 1 | 40295 | ||||
| C45G9:ChIPSeqTF | 1 | 40295 | ||||
| C45G9:TRF | 1 | 40295 | ||||
| C45G9:Dust | 1 | 40295 | ||||
| C45G9:inverted | 1 | 40295 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | F54D8 | 39996 | ||||
| Overlap_left | R144 | |||||
| Clone_left_end | C45G9 | 1 | ||||
| F54D8 | 39996 | |||||
| Clone_right_end | R144 | 3168 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080873 | ||
| NDB_ID | _U21323 | |||||
| NDB_SV | FO080873.2 | |||||
| Secondary_accession | U21323 | |||||
| DB_remark | The 5' clone is R144, 800 bp overlap; the 3' clone is F54D8, 300 bp overlap. Actual start of this clone is at base position 1 of C45G9; actual end is at 2739 of F54D8. | |||||
| [121025] Sequence correction WBsf268345 : Insertion T1 bases from @ 12832 | ||||||
| [121025] Sequence correction WBsf268245 : Insertion G1 bases from @ 31189 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Bentley D | ||||
| From_laboratory | RW | |||||
| Date | 12 Aug 1994 00:00:00 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C45G9 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 38db78706507781bab6408e8a42545a8 | ||||
| Status | Finished | |||||
| Submitted | 12 Aug 1994 00:00:00 | |||||
| Map | Sequence-III | |||||
| Interpolated_map_position | III | -2.20484 | ||||
| Method | Genomic_canonical |
