WormBase Tree Display for Sequence: C45E5
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| C45E5 | DNA | C45E5 | 27188 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (35) | ||||
| CDS_child (76) | ||||||
| Transcript | C45E5.7 | 19962 | 19982 | |||
| C45E5.8 | 1783 | 1763 | ||||
| C45E5.9 | 16437 | 16417 | ||||
| C45E5.10 | 4888 | 4868 | ||||
| C45E5.11 | 14604 | 14624 | ||||
| C45E5.12 | 20275 | 20255 | ||||
| C45E5.13 | 5200 | 5220 | ||||
| C45E5.14 | 25953 | 25933 | ||||
| C45E5.15 | 8775 | 8795 | ||||
| C45E5.16 | 3757 | 3777 | ||||
| C45E5.17 | 4532 | 4552 | ||||
| C45E5.18 | 15122 | 15142 | ||||
| C45E5.19 | 13259 | 13239 | ||||
| C45E5.20 | 16125 | 16105 | ||||
| C45E5.21 | 26095 | 26115 | ||||
| C45E5.22 | 8550 | 8530 | ||||
| C45E5.23 | 4535 | 4555 | ||||
| C45E5.24 | 25259 | 25279 | ||||
| C45E5.25 | 5537 | 5517 | ||||
| C45E5.26 | 2288 | 2268 | ||||
| C45E5.27 | 5635 | 5615 | ||||
| C45E5.28 | 7730 | 7750 | ||||
| C45E5.29 | 8205 | 8225 | ||||
| C45E5.30 | 15681 | 15661 | ||||
| C45E5.31 | 3331 | 3311 | ||||
| C45E5.32 | 19967 | 19947 | ||||
| C45E5.33 | 25282 | 25262 | ||||
| C45E5.34 | 23066 | 23086 | ||||
| C45E5.35 | 20272 | 20252 | ||||
| C45E5.36 | 21299 | 21319 | ||||
| C45E5.37 | 26564 | 26584 | ||||
| C45E5.38 | 5538 | 5518 | ||||
| C45E5.39 | 13895 | 13875 | ||||
| C45E5.40 | 20005 | 19985 | ||||
| C45E5.41 | 20276 | 20256 | ||||
| C45E5.42 | 20102 | 20082 | ||||
| C45E5.43 | 2232 | 2252 | ||||
| C45E5.44 | 3382 | 3362 | ||||
| C45E5.45 | 10660 | 10640 | ||||
| C45E5.46 | 25950 | 25930 | ||||
| C45E5.47 | 16122 | 16102 | ||||
| C45E5.48 | 2474 | 2454 | ||||
| C45E5.49 | 24903 | 24923 | ||||
| C45E5.50 | 25107 | 25127 | ||||
| C45E5.51 | 3620 | 3640 | ||||
| C45E5.52 | 6649 | 6669 | ||||
| C45E5.53 | 20510 | 20639 | ||||
| C45E5.54 | 7343 | 6424 | ||||
| C45E5.1.1 | 13641 | 16348 | ||||
| C45E5.2.1 | 10583 | 12318 | ||||
| C45E5.4.1 | 4258 | 6344 | ||||
| C45E5.6a.1 | 19128 | 16601 | ||||
| C45E5.6b.1 | 27100 | 16614 | ||||
| C45E5.6c.1 | 18604 | 16990 | ||||
| Pseudogene | C45E5.3 | 8815 | 10079 | |||
| PCR_product (16) | ||||||
| Allele (214) | ||||||
| Oligo_set | Aff_C45E5.1 | 14370 | 16058 | |||
| Aff_C45E5.2 | 11859 | 13248 | ||||
| Aff_C45E5.3 | 9372 | 10109 | ||||
| Aff_C45E5.4 | 4299 | 6159 | ||||
| Aff_C45E5.6 | 17684 | 16990 | ||||
| Feature_object (186) | ||||||
| Feature_data | C45E5:Polysome | 1 | 27188 | |||
| C45E5:TranscriptionallyActiveRegion | 1 | 27188 | ||||
| C45E5:ChIPSeqTF | 1 | 27188 | ||||
| C45E5:TRF | 1 | 27188 | ||||
| C45E5:Dust | 1 | 27188 | ||||
| C45E5:inverted | 1 | 27188 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | F44E8 | 17589 | ||||
| Overlap_left | H35B03 | |||||
| Clone_left_end | F44E8 | 17589 | ||||
| C45E5 | 1 | |||||
| Clone_right_end | H35B03 | 21820 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080870 | ||
| NDB_ID | _U61950 | |||||
| NDB_SV | FO080870.1 | |||||
| Secondary_accession | U61950 | |||||
| DB_remark | The 5' clone is H35B03, 2635 bp overlap; the 3' clone is F44E8, 9600 bp overlap. Actual start of this clone is at base position 1 of C45E5; actual end is at 485 of C31H1. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Le TT | ||||
| From_laboratory | RW | |||||
| Date | 12 Apr 1996 00:00:00 | |||||
| 19 Jun 1996 00:00:00 | ||||||
| Date_directory | 960410 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C45E5 | ||||
| Remark | added 8000 bp to the 3' end 010911 db | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | a94ae79270ffec7fd7a3ef32f23c6839 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 12 Apr 1996 00:00:00 | |||||
| Map | Sequence-IV | |||||
| Interpolated_map_position | IV | 2.25925 | ||||
| Method | Genomic_canonical |
