WormBase Tree Display for CDS: C44H4.3
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| C44H4.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C44H4 | |||
| Structure | Source_exons | 1 | 78 | |||
| 130 | 273 | |||||
| 323 | 466 | |||||
| 520 | 801 | |||||
| 848 | 1291 | |||||
| 1343 | 2017 | |||||
| 2087 | 2362 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EFP4 | ||
| UniProt | UniProtAcc | G5EFP4 | ||||
| UniProt_GCRP | UniProtAcc | G5EFP4 | ||||
| AlphaFold | entry | G5EFP4 | ||||
| NCBI_protein | GI_number | GI:3874943 | ||||
| TREEFAM | TREEFAM_ID | TF318447 | ||||
| Protein_id | CHROMOSOME_X | CAB01865 | 1 | |||
| DB_remark | SYM-1 protein; contains similarity to Pfam domain PF13855 (Leucine rich repeat); contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR032675 (Leucine-rich repeat domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00006366 | ||||
| Corresponding_transcript | C44H4.3.1 | |||||
| Corresponding_protein | CE08724 | |||||
| Corresponding_PCR_product | cenix:19-h8 | |||||
| mv_C44H4.3 | ||||||
| sjj_C44H4.3 | ||||||
| Corresponding_oligo_set | 173273_at | |||||
| 18621782 | ||||||
| 193344_at | ||||||
| Aff_C44H4.3 | ||||||
| GPL13394_WBGene00006366 | ||||||
| GPL13914_C44H4.3 | ||||||
| GPL14144_C44H4.3_1306-1365_0.910_26_B | ||||||
| GPL14144_C44H4.3_1362-1421_0.914_22_A | ||||||
| GPL14144_C44H4.3_825-884_0.869_64_C | ||||||
| GPL19516_CGZ0008887 | ||||||
| GPL21109_C44H4.3 | ||||||
| GPL3518_CE08724 | ||||||
| GPL8304_CE_WBGene00006366_A | ||||||
| GPL8304_CE_WBGene00006366_B | ||||||
| GPL8304_CE_WBGene00006366_C | ||||||
| GPL8673_C44H4_3P00557 | ||||||
| GPL8673_C44H4_3P01333 | ||||||
| GPL8673_C44H4_3P01883 | ||||||
| Matching_cDNA (293) | ||||||
| RNAi_result (11) | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Leucine-rich repeat-containing protein let-4 | Accession_evidence | UniProt | TR:G5EFP4 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
