WormBase Tree Display for Sequence: C43G2

C43G2 DNA: C43G2 28922
  SMap: S_child: Gene_child (32)
      CDS_child: C43G2.1a 3574 1044
        C43G2.1b 2893 1044
        C43G2.1c 3574 1044
        C43G2.2:wp240 20471 14043
        C43G2.2a 20471 14372
        C43G2.2b 20471 14372
        C43G2.3:wp114 26382 27503
        C43G2.3a 26382 27503
        C43G2.3b 27130 27503
        C43G2.4 10841 13282
        C43G2.4:wp104 10841 13282
        C43G2.5:wp104 5373 8256
        C43G2.5a 5373 9024
        C43G2.5b 5574 9024
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g136_x14_IV_p 6763 7167
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g66n11_x14_IV_m 20471 14375
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g5n11_x14_IV_m 1752 1431
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g41n11_x14_IV_m 3574 1047
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g137_x14_IV_p 6643 6744
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g2n11_x14_IV_m 3574 1047
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g106_x14_IV_p 5634 6253
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g34_x14_IV_m 19437 14375
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g31n11e7k51_x14_IV_m 20471 17224
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g112_x14_IV_p 6670 7053
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g136_x14_IV_p 12370 12423
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g41n11_x14_IV_m 19860 19489
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g121_x14_IV_p 11722 12102
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g150_x14_IV_p 11185 11617
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g132_x14_IV_p 6248 6762
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12_x14_IV_m 3574 1047
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g44n11_x14_IV_m 20471 19606
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g142_x14_IV_p 13109 13231
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g46_x14_IV_m 19437 14375
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g114_x14_IV_p 248 344
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g127_x14_IV_m 14115 13910
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g111_x14_IV_p 11732 11967
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g64_x14_IV_m 15565 15374
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g16n11_x14_IV_m 3574 1600
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g123_x14_IV_m 20321 19843
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g94_x14_IV_m 17621 17458
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g101_x14_IV_m 17885 17787
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g100_x14_IV_m 19384 18947
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g67_x14_IV_m 1288 1047
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g57_x14_IV_m 15227 14434
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g68_x14_IV_m 1542 1295
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g152_x14_IV_p 11639 11751
        RNASEQ_embryo_him-8_20dC_post-L1_g55_x14_IV_p 248 569
        RNASEQ_embryo_him-8_20dC_post-L1_g15n11_x14_IV_m 3574 1047
        RNASEQ_embryo_him-8_20dC_post-L1_g25n11_x14_IV_m 20471 14375
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g107e9k55_x14_IV_p 12675 12842
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g107_x14_IV_p 10841 13279
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g27n11_x14_IV_m 1752 1413
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g103_x14_IV_p 5373 9021
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g9n11_x14_IV_p 27130 27308
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g33n11_x14_IV_m 20471 14375
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g4_x14_IV_p 26382 27500
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g11_x14_IV_m 3574 1047
        RNASEQ_L4_soma_JK1107_no_DNaseI_g112_x14_IV_p 248 392
        RNASEQ_L4_soma_JK1107_no_DNaseI_g162_x14_IV_m 13903 13767
        RNASEQ_L4_soma_JK1107_no_DNaseI_g98_x14_IV_p 5574 7029
        RNASEQ_L4_soma_JK1107_no_DNaseI_g113_x14_IV_p 7045 7384
        RNASEQ_L4_soma_JK1107_no_DNaseI_g99_x14_IV_p 26382 26569
        RNASEQ_L4_soma_JK1107_no_DNaseI_g108_x14_IV_p 13109 13216
        RNASEQ_L4_soma_JK1107_no_DNaseI_g6n11_x14_IV_m 3574 1047
        RNASEQ_L4_soma_JK1107_no_DNaseI_g193_x14_IV_p 11911 12063
        RNASEQ_L4_soma_JK1107_no_DNaseI_g31n11_x14_IV_m 20471 14375
        RNASEQ_L4_soma_JK1107_no_DNaseI_g115_x14_IV_p 27130 27494
        RNASEQ_L4_soma_JK1107_no_DNaseI_g90n11_x14_IV_p 10841 11028
        RNASEQ_L4_soma_JK1107_no_DNaseI_g197_x14_IV_p 11203 11599
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g67_x14_IV_p 248 575
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g63n11_x14_IV_p 4344 4984
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g34n11_x14_IV_p 9044 10512
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g109_x14_IV_p 10841 13279
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g24n11_x14_IV_m 20471 14375
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g112_x14_IV_p 8941 9021
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g6n11_x14_IV_m 3574 1047
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g100_x14_IV_p 5574 6301
        RNASEQ_early_embryo_g131_x14_IV_p 13109 13222
        RNASEQ_early_embryo_g118_x14_IV_p 12690 12776
        RNASEQ_early_embryo_g128_x14_IV_p 8941 9021
        RNASEQ_early_embryo_g100_x14_IV_p 6652 7170
        RNASEQ_early_embryo_g27n11_x14_IV_m 3574 1047
        RNASEQ_early_embryo_g99_x14_IV_p 11692 12501
        RNASEQ_early_embryo_g14n11_x14_IV_m 20471 14375
        RNASEQ_early_embryo_g93_x14_IV_p 11122 11575
        RNASEQ_early_embryo_g116_x14_IV_p 10937 11053
        RNASEQ_early_embryo_g149_x14_IV_p 5673 6310
        RNASEQ_early_embryo_g40n11_x14_IV_m 1752 1431
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g22n11_x14_IV_m 3574 1047
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11e7k53_x14_IV_m 17481 17224
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g85_x14_IV_p 12690 13225
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g93_x14_IV_p 11122 11503
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g83_x14_IV_p 10841 10938
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11_x14_IV_m 20471 14375
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g87_x14_IV_p 5574 9021
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g33n11_x14_IV_m 20471 14375
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g11n11_x14_IV_m 3574 1047
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g106_x14_IV_p 6643 7173
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g22n11_x14_IV_m 1752 1413
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g120_x14_IV_p 5574 5672
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g105s1k63_x14_IV_p 10841 13279
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g20n11_x14_IV_m 20471 14375
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g111_x14_IV_p 5574 6175
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g14n11_x14_IV_m 3574 1047
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g114_x14_IV_p 6763 7170
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g35n11_x14_IV_m 2893 2871
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g86_x14_IV_p 11122 13279
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g118_x14_IV_p 8941 9021
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g107_x14_IV_p 6712 7420
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g24n11_x14_IV_m 20471 14375
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g111_x14_IV_p 5583 6307
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g18n11_x14t1_IV_m 3574 1047
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g74_x14_IV_p 11122 13279
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g123_x14_IV_p 7427 8901
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g140_x14_IV_p 11122 11623
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g14n11_x14_IV_m 3574 1047
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g25n11_x14_IV_m 20471 14375
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g101_x14_IV_p 5574 6238
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g117_x14_IV_p 7120 7483
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g157_x14_IV_p 6263 7023
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g36_x14_IV_p 26382 27500
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g125_x14_IV_p 11639 11973
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g189_x14_IV_p 10881 11059
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g122_x14_IV_p 6709 7041
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g85_x14_IV_p 5373 5660
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g182_x14_IV_p 27130 27258
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g11_x14_IV_m 3574 1047
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g53n11_x14_IV_m 20471 14375
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g105_x14_IV_p 5574 5642
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g74_x14_IV_m 16313 14375
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g67n11_x14_IV_m 3574 1047
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g6n11_x14_IV_m 1752 1431
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g94_x14_IV_m 17621 16413
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g160_x14_IV_p 5652 6241
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g82_x14_IV_m 18948 17793
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g59n11_x14_IV_m 20471 19786
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g82n11_x14_IV_p 10841 11172
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g131_x14_IV_p 11995 12402
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g152_x14_IV_p 5673 6241
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g49n11_x14_IV_m 20471 14375
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g103_x14_IV_p 11594 11988
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g94_x14_IV_p 7006 7390
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11_x14_IV_m 3574 1047
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g74n11_x14_IV_m 14342 14046
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g99n11_x14_IV_m 16505 16164
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g107_x14_IV_p 12690 13234
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g151_x14_IV_p 6643 6741
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g89_x14_IV_p 5373 5663
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g63n11_x14_IV_m 14342 14046
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g98_x14_IV_p 11552 12009
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g114_x14_IV_p 11182 11545
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g89n11_x14_IV_p 10841 11013
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g108_x14_IV_p 12055 12405
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g5n11_x14_IV_m 3574 1047
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g111_x14_IV_p 13109 13234
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g118n11_x14_IV_p 5574 5651
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g46n11_x14_IV_m 20471 14375
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g176_x14_IV_p 8941 8988
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g98_x14_IV_p 7003 7456
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g94_x14_IV_p 5574 5642
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g15n11_x14t1_IV_m 3574 1047
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g150_x14_IV_p 11698 11991
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g111_x14_IV_p 12391 12513
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g121n11_x14_IV_p 10841 11055
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g119_x14_IV_p 13109 13183
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g47_x14_IV_p 26382 27500
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g117_x14_IV_p 5646 6310
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g43n11_x14_IV_m 20471 14375
        C43G2.gc1 248 578
        C43G2.gc2 3574 1044
        C43G2.gc3 4024 8926
        C43G2.gc4 10841 13282
        C43G2.gc5 20471 14043
        C43G2.gc6 26289 27503
        ContigIV.elegans.jigsaw.1164.mRNA1164 20509 13508
        ContigIV.elegans.jigsaw.1162.mRNA1162 5300 10280
        ContigIV.elegans.jigsaw.1165.mRNA1165 26350 27561
        ContigIV.elegans.jigsaw.1163.mRNA1163 10810 13412
        ContigIV.elegans.jigsaw.1161.mRNA1161 3581 644
        AG1201_C43G2.1.T2 1635 1044
        AG1201_C43G2.1.T1 3574 1044
        AG1201_C43G2.1.T3 3574 1044
        AG1201_C43G2.1.T4 3574 3479
        AG1201_C43G2.5.T9 4058 5675
        AG1201_C43G2.5.T5 5373 9024
        AG1201_C43G2.5.T4 5574 9024
        AG1201_C43G2.5.T1 8941 9024
        AG1201_C43G2.5.T2 10841 13282
        AG1201_C43G2.2.T7 15381 14372
        AG1201_C43G2.2.T5 20471 14372
        AG1201_C43G2.2.T3 20471 15340
        AG1201_C43G2.2.T2 20471 19618
        AG1201_C43G2.2.T1 20471 19621
        AG1201_C43G2.3.T1 26382 27503
      Transcript (39)
      PCR_product (19)
      Allele (314)
      Oligo_set: Aff_C43G2.1 1749 1044
        Aff_C43G2.2 15288 14043
        Aff_C43G2.3 26431 27503
        Aff_C43G2.4 11995 13282
        Aff_C43G2.5 6742 9024
        Aff_F38A5.1 28921 28183
      Feature_object (357)
      Feature_data: C43G2:Polysome 1 28922
        C43G2:TranscriptionallyActiveRegion 1 28922
        C43G2:ChIPSeqTF 1 28922
        C43G2:TRF 1 28922
        C43G2:Dust 1 28922
        C43G2:inverted 1 28922
      Homol_data (21)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: F38A5 28123
    Overlap_left: C01G5
    Clone_left_end: F38A5 10190
    Clone_right_end: C01G5 200
      C43G2 28922
      F38A5 18733
  DB_info: Database: EMBL NDB_AC FO080265
        NDB_ID _U70848
        NDB_SV FO080265.1
    Secondary_accession: U70848
    DB_remark: The 5' clone is C01G5, 600 bp overlap; the 3' clone is F38A5, 800 bp overlap. Actual start of this clone is at base position 26473 of C01G5; actual end is at 28922 of C43G2.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Fulton B
      Wohldmann P
    From_laboratory: RW
    Date: 07 Jun 1996 00:00:00
      09 Mar 1999 00:00:00
    Date_directory: 960606
    Species: Caenorhabditis elegans
  Visible: Clone: C43G2
  Properties: Genomic_canonical
    Checksum: MD5: d30c0c01e16545e57b054bdda58eb42d
    Status: Shotgun
      Finished
      Submitted: 07 Jun 1996 00:00:00
  Map: Sequence-IV
  Interpolated_map_position: IV 3.20561
  Method: Genomic_canonical