WormBase Tree Display for CDS: C40A11.7
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C40A11.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C40A11 | |||
Structure | Source_exons | 1 | 120 | |||
276 | 524 | |||||
698 | 812 | |||||
1327 | 1505 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9TZA6 | ||
UniProt | UniProtAcc | Q9TZA6 | ||||
UniProt_GCRP | UniProtAcc | Q9TZA6 | ||||
AlphaFold | entry | Q9TZA6 | ||||
NCBI_protein | GI_number | GI:351058724 | ||||
TREEFAM | TREEFAM_ID | TF315649 | ||||
Protein_id | CHROMOSOME_II | CCD66468 | 1 | |||
DB_remark | contains similarity to Pfam domain PF02214 (BTB/POZ domain); contains similarity to Interpro domains IPR000210 (BTB/POZ domain), IPR045068 (BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1/2/3), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR003131 (Potassium channel tetramerisation-type BTB domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00016550 | ||||
Corresponding_transcript | C40A11.7.1 | |||||
Corresponding_protein | CE19370 | |||||
Corresponding_PCR_product | cenix:193-e11 | |||||
mv_C40A11.7 | ||||||
sjj_C40A11.7 | ||||||
Corresponding_oligo_set (12) | ||||||
Matching_cDNA (30) | ||||||
RNAi_result | WBRNAi00011807 | |||||
WBRNAi00042245 | ||||||
WBRNAi00042244 | ||||||
WBRNAi00029702 | ||||||
WBRNAi00011808 | ||||||
Microarray_results (13) | ||||||
Brief_identification | BTB domain-containing protein | Accession_evidence | UniProt | TR:Q9TZA6 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |