WormBase Tree Display for Sequence: C26E1

C26E1 DNA: C26E1 21378
  SMap: S_child: Gene_child: WBGene00007748 19012 21168
        WBGene00198461 3050 2902
        WBGene00007747 11394 11924
        WBGene00007749 15707 18659
        WBGene00196836 8228 8105
        WBGene00195551 9421 9558
        WBGene00197126 4441 4590
      CDS_child (115)
      Transcript: C26E1.4 9421 9558
        C26E1.5 8228 8105
        C26E1.6 4441 4590
        C26E1.7 3050 2902
        C26E1.1.1 11394 11924
        C26E1.2a.1 19012 21168
        C26E1.2b.1 19012 21163
        C26E1.3.1 15707 18659
      PCR_product: cenix:106-g11 17237 18020
        cenix:158-f5 10664 12217
        cenix:52-e10 20375 21055
        mv_C26E1.1 11395 11922
        mv_C26E1.2 19043 21076
        mv_C26E1.3 15567 18450
        p_C26E1.1_93 9394 11393
        sjj_C26E1.1 11388 12573
        sjj_C26E1.2 19604 20579
        sjj_C26E1.3 16883 18050
      Allele (289)
      Oligo_set: Aff_C26E1.1 11394 11924
        Aff_C26E1.2 20353 21078
        Aff_C26E1.3 17523 18452
      Feature_object (133)
      Feature_data: C26E1:Polysome 1 21378
        C26E1:TranscriptionallyActiveRegion 1 21378
        C26E1:ChIPSeqTF 1 21378
        C26E1:TRF 1 21378
        C26E1:Dust 1 21378
      Homol_data: C26E1:RNAi 1 21378
        C26E1:SAGE 1 21378
        C26E1:Mass-spec 1 21378
        C26E1:Expr 1 21378
        C26E1:wublastx_brenneri 1 21378
        C26E1:wublastx_briggsae 1 21378
        C26E1:wublastx_japonica 1 21378
        C26E1:wublastx_remanei 1 21378
        C26E1:RepeatMasker 1 21378
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: C50B6 21278
    Overlap_left: F32F2
    Clone_left_end: C26E1 1
      C50B6 21278
  DB_info: Database: EMBL NDB_AC Z81040
        NDB_SV Z81040.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Sims MA
    From_laboratory: HX
    Date_directory: 960319
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: C26E1
  Properties: Genomic_canonical
    Checksum: MD5: 2a553f760d980bd3a8a26c2178d69f8a
    Status: Finished: 19 Mar 1996 00:00:00
      Submitted: 21 Oct 1996 00:00:00
      Annotated: 13 Mar 1997 00:00:00
  Map: Sequence-V Ends: Left: 7558
        Right: 7579
  Interpolated_map_position: V 5.10573
  Assembly_tags: Finished Right 21378 21378
    Clone left end 1 4 Left hand end of C26E1.
      21278 21281 Left hand end of C50B6.
    Finished Left 1 1
    annotation 13983 13983 There is point mutation on a single clone which has changed from an A to a T.
    Polymorphism 21280 21281 Possible polymorphism here. C26E1 shows GAGA the ovelaping cosmid C50B6 has GATC. Alternatively the GATC in C50B6 could be a cloning artifact.
  Method: Genomic_canonical