WormBase Tree Display for Sequence: C17D12

C17D12 DNA: C17D12 41552
  SMap: S_child: Gene_child (21)
      CDS_child (179)
      Transcript: C17D12.8 26488 26618
        C17D12.10 1284 1373
        C17D12.11 13436 13384
        C17D12.12 4930 4869
        C17D12.13 38328 38446
        C17D12.14 13930 13861
        C17D12.15 2531 2629
        C17D12.16 38446 38328
        C17D12.17 12300 12371
        C17D12.18 19035 19191
        C17D12.19 1855 1442
        C17D12.20 11099 11477
        C17D12.t1 1367 1295
        C17D12.t2 1960 2032
        C17D12.t3 2624 2543
        C17D12.1a.1 28845 33417
        C17D12.1b.1 29249 33312
        C17D12.2a.1 9419 18885
        C17D12.2b.1 9475 18496
        C17D12.2c.1 14120 18496
        C17D12.2d.1 14120 18496
        C17D12.3.1 37436 33989
        C17D12.5.1 3235 4510
        C17D12.7.1 28487 21200
        C17D12.9.1 39072 38749
      PCR_product (24)
      Allele (835)
      Oligo_set: Aff_C17D12.1A 30248 33312
        Aff_C17D12.1B 28879 28995
        Aff_C17D12.2 15571 18496
        Aff_C17D12.4 9955 9288
        Aff_C17D12.5 3836 4467
        Aff_C17D12.6 884 140
        Aff_C17D12.7 22383 21784
        Aff_C17D12.3 35162 33946
      Feature_object (316)
      Feature_data: C17D12:Polysome 1 41552
        C17D12:TranscriptionallyActiveRegion 1 41552
        C17D12:ChIPSeqTF 1 41552
        C17D12:TRF 1 41552
        C17D12:Dust 1 41552
        C17D12:inverted 1 41552
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: Y47H9A 41446
    Overlap_left: F15D3
    Clone_left_end: C17D12 1
    Clone_right_end: F15D3 4
      C17D12 41552
  DB_info: Database: EMBL NDB_AC Z81473
        NDB_SV Z81473.3
    DB_remark: [980327 dl] : Linked to F15D3, o/l is by Sau3AI site only, confirmed using PCR by Andrew Sinson (Emory University).
      [121025] Sequence correction: SNP 0 bases @ 20648
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: White S
    From_laboratory: HX
    Date_directory: 990228
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: C17D12
  Properties: Genomic_canonical
    Checksum: MD5: 6c1e13223f4adec9631bfdc595b7677a
    Status: Finished: 28 Feb 1999 00:00:00
      Submitted: 06 Nov 1996 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-I Ends: Left: 5788
        Right: 5815
  Interpolated_map_position: I 9.29712
  Assembly_tags: annotation 23053 23080 [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Comment
      23444 23444 [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Comment Divergence with YAC data (T)
    Finished Right 41552 41549 C17D12
    Clone right end 4 1 F15D3 Overlaps at GATC site
      41552 41549 C17D12
    Clone left end 1 4 C17D12
    comment 5572 5552 ?This shouldn't go here but it fits.
      20098 20089 ?do long term off this read
      20456 20461 ?Named wrong.
    Warning 21233 21232 "POSSIBLY VECTOR: puc18 299 248 2686"
      22436 22436 "POSSIBLY VECTOR: puc18 2623 2578 2686"
    Finished Left 1 4 C17D12
  Method: Genomic_canonical