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WormBase Tree Display for CDS: C16C10.3

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Name Class

C16C10.3EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC16C10
StructureSource_exons1109
161371
4171370
14201944
19922940
29863176
32263385
DB_infoDatabaseSwissProtUniProtAccQ09249
UniProtUniProtAccQ09249
UniProt_GCRPUniProtAccQ09249
AlphaFoldentryQ09249
NCBI_proteinGI_numberGI:3874381
TREEFAMTREEFAM_IDTF318801
Protein_idCHROMOSOME_IIICAA867411
DB_remarkHRDE-1 protein; contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003165 (Piwi domain), IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00007624
Corresponding_transcriptC16C10.3.1
Corresponding_proteinCE01494
Corresponding_PCR_productTH:300F6
cenix:300-f6
mv_C16C10.3
sjj2_C16C10.3
sjj_C16C10.3
smd_C16C10.3
Corresponding_oligo_set (13)
Matching_cDNA (84)
RNAi_resultWBRNAi00005060
WBRNAi00085094
WBRNAi00098174
WBRNAi00027177
WBRNAi00040678
WBRNAi00010828
WBRNAi00028955
WBRNAi00007936
Microarray_results (16)
RNASeq_FPKM (74)
Associated_featureWBsf015700
Methodcurated