WormBase Tree Display for CDS: C16C10.3
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C16C10.3 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | C16C10 | ||
Structure | Source_exons | 1 | 109 | ||
161 | 371 | ||||
417 | 1370 | ||||
1420 | 1944 | ||||
1992 | 2940 | ||||
2986 | 3176 | ||||
3226 | 3385 | ||||
DB_info | Database | SwissProt | UniProtAcc | Q09249 | |
UniProt | UniProtAcc | Q09249 | |||
UniProt_GCRP | UniProtAcc | Q09249 | |||
AlphaFold | entry | Q09249 | |||
NCBI_protein | GI_number | GI:3874381 | |||
TREEFAM | TREEFAM_ID | TF318801 | |||
Protein_id | CHROMOSOME_III | CAA86741 | 1 | ||
DB_remark | HRDE-1 protein; contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003165 (Piwi domain), IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00007624 | |||
Corresponding_transcript | C16C10.3.1 | ||||
Corresponding_protein | CE01494 | ||||
Corresponding_PCR_product | TH:300F6 | ||||
cenix:300-f6 | |||||
mv_C16C10.3 | |||||
sjj2_C16C10.3 | |||||
sjj_C16C10.3 | |||||
smd_C16C10.3 | |||||
Corresponding_oligo_set (13) | |||||
Matching_cDNA (84) | |||||
RNAi_result | WBRNAi00005060 | ||||
WBRNAi00085094 | |||||
WBRNAi00098174 | |||||
WBRNAi00027177 | |||||
WBRNAi00040678 | |||||
WBRNAi00010828 | |||||
WBRNAi00028955 | |||||
WBRNAi00007936 | |||||
Microarray_results (16) | |||||
RNASeq_FPKM (74) | |||||
Associated_feature | WBsf015700 | ||||
Method | curated |